lineage | Count |
---|---|
lineage2.2.1 | 6 |
lineage4.5 | 1 |
lineage4.1.2.1 | 3 |
lineage2.2.1.2 | 2 |
lineage4.9 | 12 |
26 | |
lineage2.2 | 3 |
La1.4 | 1 |
lineage7;lineage2.2.1.2 | 1 |
lineage4.3.4 | 1 |
lineage4.1 | 1 |
lineage4 | 8 |
lineage4.4.2 | 1 |
La1.2 | 1 |
spoligotype | Count |
---|---|
None | 67 |
ID | Drug resistance | Lineage | Country iso2 | SRR1062919 | HR-TB | lineage2.2.1 | None | ERR752229 | Other | lineage4.5 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR26399239 | Sensitive | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR16278274 | Other | La1.4 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR26399490 | Sensitive | lineage4.9 | None | ERR181744 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675270 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675456 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212034 | HR-TB | None | ERR4816852 | Other | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | ERR212123 | Other | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR2693227 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.1 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341330 | HR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5535933 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341456 | Other | None | DRR188519 | Other | lineage4.4.2 | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046299 | HR-TB | None | SRR6046492 | Other | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR3797081 | Sensitive | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR387051 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811493 | HR-TB | None |
---|