Rv0565c - c.1173G>C


Drug resistance types
96 Sensitive 4 RR-TB 32 HR-TB 36 MDR-TB 3 Pre-XDR-TB 1 XDR-TB 87 Other
lineage Counts
lineage Count
lineage6.2.3 110
lineage4.1.2.1 4
lineage4.9;lineage6.3 7
lineage2.1;lineage4.9;lineage6.3 9
lineage4.9 19
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage2.2.1 4
lineage2.1 3
lineage4.2;lineage4.8.1;lineage4.9 1
lineage4.6.3;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage4.6.2.2 1
La1.7;lineage4.9 1
15
lineage4.5 1
M.canetti;lineage2.1;lineage4.9 7
La1.2.BCG 1
lineage3 1
lineage2.1;lineage6.3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9 14
lineage1.1.2 1
lineage4.3.4.2.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9 9
La3;lineage4.9 3
lineage4 2
lineage2.2.1;lineage3 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.1.3 2
lineage4.1.2.1;lineage6.2.3 2
M.canetti;lineage2.1;lineage6.3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;lineage2.1;lineage4.9;lineage6.3 4
La3;lineage2.2.1 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.7;M.canetti;lineage4.9 1
lineage6.3.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage2.2.1;lineage6.3 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.1.1.1 1
lineage1.1.2;lineage6.2.3 1
La3;lineage2 1
M.canetti;lineage2.1 1
La3;lineage2.1;lineage4.9 2
La1.7;lineage4.2 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;lineage2.1;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage3.1 1
spoligotype Counts
spoligotype Count
None 259
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR21658384 Sensitive lineage6.2.3 None
ERR4820854 Other lineage4.1.2.1 None
ERR2027253 Other lineage6.2.3 None
ERR4192377 Sensitive lineage6.2.3 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR9787313 Sensitive lineage6.2.3 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3806836 Sensitive lineage6.2.3 None
SRR1184294 Other lineage4.9 None
ERR1023262 Sensitive lineage6.2.3 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR4814352 Other lineage2.2.1 None
ERR4819781 Other lineage2.2.1 None
ERR3804029 Sensitive lineage6.2.3 None
ERR11050232 Sensitive lineage6.2.3 None
ERR9786694 Other lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR12268479 Sensitive lineage6.2.3 None
SRR1196546 Other lineage4.9 None
ERR9787228 Sensitive lineage6.2.3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3801616 Sensitive lineage6.2.3 None
ERR551438 Sensitive lineage6.2.3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR11049478 Sensitive lineage6.2.3 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
ERR439987 Sensitive lineage6.2.3 None
ERR9786682 Other lineage4.1.2.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR3675572 Other None
ERR9786671 Other None
ERR2514692 Other None
ERR9787342 Sensitive lineage6.2.3 None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR2181458 Sensitive lineage6.2.3 gh
ERR9787061 Sensitive lineage6.2.3 None
ERR752229 Other lineage4.5 None
SRR1196583 Other lineage4.9 None
ERR3804153 Sensitive lineage6.2.3 None
SRR21722117 Sensitive lineage6.2.3 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4800341 HR-TB lineage3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR10679993 MDR-TB lineage6.2.3 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR5341330 Other lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3803966 Other lineage6.2.3 None
SRR7517687 Sensitive lineage6.2.3 ci
ERR9787271 Sensitive lineage6.2.3 None
SRR5535933 Other lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
ERR3801002 Sensitive lineage6.2.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR11082975 Other lineage6.2.3 None
ERR3804007 Sensitive lineage6.2.3 None
ERR10680115 RR-TB lineage6.2.3 None
ERR3283044 Other lineage4 None
ERR4192564 Sensitive lineage6.2.3 None
ERR10680114 MDR-TB lineage6.2.3 None
SRR6045526 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR9787178 Sensitive lineage6.2.3 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR551440_ERR551439_ERR551438 Sensitive lineage6.2.3 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR26159043 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR10849240 Sensitive lineage6.2.3 None
ERR551830 Sensitive lineage6.2.3 None
ERR2679289 HR-TB lineage4.1.2.1;lineage6.2.3 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4821969 Sensitive lineage6.2.3 None
ERR9787288 Sensitive lineage6.2.3 None
SRR1165699 Other lineage4.9 None
ERR9787121 Other lineage6.2.3 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR10680019 MDR-TB lineage6.2.3 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR9787055 Other lineage6.2.3 None
ERR4192566 Sensitive lineage6.2.3 None
ERR9787305 Sensitive lineage6.2.3 None
SRR1165628 Other La3;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR9787261 Sensitive lineage6.2.3 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR3803811 Sensitive lineage6.2.3 None
ERR11044630 Sensitive lineage6.2.3 None
ERR3804018 Sensitive lineage6.2.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR3675311 Other lineage4.9 None
SRR26124837 Sensitive lineage6.2.3 None
ERR11081708 Sensitive lineage6.2.3 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3803791 Other lineage6.2.3 None
SRR998628 Sensitive lineage6.2.3 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR998630 Sensitive lineage6.2.3 None
SRR18289181 Sensitive lineage6.2.3 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR6789626 Other None
SRR7535086 Other None
SRR18213713 HR-TB None
ERR212001 HR-TB None
ERR4816999 Other None
SRR28119777 Other lineage4.9 None
ERR552294 Sensitive lineage6.2.3 de
ERR2446369 Sensitive lineage6.2.3 nl
ERR3170426 Sensitive lineage6.2.3 gh
ERR2517500 Sensitive lineage6.2.3 nl
ERR551419 Sensitive lineage6.2.3 None
ERR3275199 Sensitive lineage6.2.3 nl
SAMEA2533942 Sensitive lineage6.2.3 None
ERR550942 Sensitive lineage6.2.3 None
ERR1023280 Sensitive lineage6.2.3 None
SRR21690035 Sensitive lineage6.2.3 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR9787379 Sensitive lineage6.2.3 None
ERR11050062 Sensitive lineage6.2.3 None
ERR9787139 Other lineage6.3.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR11067442 Sensitive lineage6.2.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR21658761 Sensitive lineage6.2.3 None
SRR998629 Sensitive lineage6.2.3 None
ERR9787249 Sensitive lineage6.2.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR11082792 Sensitive lineage6.2.3 None
SRR26399973 Other La3;lineage4.9 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR9787229 Sensitive lineage6.2.3 None
ERR9787143 Sensitive lineage6.2.3 None
ERR387051 RR-TB lineage4.9 None
ERR9787040 Other lineage6.2.3 None
SRR6046133 HR-TB lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR4192357 Sensitive lineage6.2.3 None
ERR4829212 Sensitive lineage6.2.3 None
ERR9787116 Other lineage6.2.3 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3803993 Sensitive lineage6.2.3 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3804022 Sensitive lineage6.2.3 None
SRR21727754 Sensitive lineage6.2.3 None
ERR176793 Other lineage4.1.1.1 None
ERR9787085 Sensitive lineage6.2.3 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9787060 Sensitive lineage6.2.3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3804158 Sensitive lineage6.2.3 None
ERR9786611 HR-TB lineage4.1.3 None
ERR1023232 Sensitive lineage6.2.3 None
ERR3324368 RR-TB lineage1.1.2;lineage6.2.3 None
ERR11049207 Sensitive lineage6.2.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
SRR21710575 Sensitive lineage6.2.3 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR12416840 MDR-TB lineage4.9 None
ERR4816403 Other lineage6.2.3 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
SRR6046594 Other lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
SRR11662690 HR-TB lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR161037 HR-TB lineage4.9 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR4192378 Sensitive lineage6.2.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR9786604 Other None
ERR4815604 Other None
ERR9117709 Other None
ERR234659 HR-TB None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR25827682 Other None
SRR3675236 Other None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4192565 Sensitive lineage6.2.3 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR551439 Sensitive lineage6.2.3 None
SRR8649120 Sensitive lineage6.2.3 None
ERR9787287 Sensitive lineage6.2.3 None
SRR998631 Sensitive lineage6.2.3 None
ERR551831 Sensitive lineage6.2.3 None
SRR18911881 Sensitive lineage6.2.3 None
ERR9894636 Sensitive lineage6.2.3 None
ERR5863146 Sensitive lineage6.2.3 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3800960 Other lineage6.2.3 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR1023268 Sensitive lineage6.2.3 None
ERR9787240 Sensitive lineage6.2.3 None
ERR12544072 Sensitive lineage4.1.2.1;lineage6.2.3 None
ERR11067689 Sensitive lineage6.2.3 None
ERR9787222 Sensitive lineage6.2.3 None
SRR7131015 Sensitive lineage6.2.3 None
ERR4816466 HR-TB lineage4.9 None
ERR702406 Other lineage2.1 None
ERR11081213 Sensitive lineage6.2.3 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR7131078 Sensitive lineage6.2.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1023226 Sensitive lineage6.2.3 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR4162021 Sensitive lineage6.2.3 None
ERR1203062 Sensitive lineage6.2.3 gh
ERR3806456 Sensitive lineage6.2.3 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR10680108 MDR-TB lineage6.2.3 None
ERR11068084 Sensitive lineage6.2.3 None
ERR9787245 Sensitive lineage6.2.3 None
ERR4828921 Sensitive lineage6.2.3 None
ERR3806845 Sensitive lineage6.2.3 None