Rv0639 - c.249G>A
Drug resistance types
33 Sensitive
5 RR-TB
28 HR-TB
9 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
34 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 1 |
| lineage4.9 | 45 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 3 |
| lineage6.1.3 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| 1 | |
| La3;lineage4.9 | 5 |
| La1.6;La3;lineage4.9 | 2 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage2.2.1 | 4 |
| lineage1.2.2.1;lineage4.4.1.1 | 1 |
| lineage4.9.1 | 1 |
| La1.2 | 2 |
| lineage4.3.4.2.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.1.1.3 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.2;lineage4.9 | 2 |
| lineage2.2 | 2 |
| lineage4.4.2 | 1 |
| lineage4.5 | 1 |
| lineage4.4.1.1.1 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 110 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR6044875 | Other | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR1023236 | Other | lineage6.1.3 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR212001 | HR-TB | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | SRR3675234 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR176751 | HR-TB | lineage4.9 | None | ERR11466062 | Sensitive | lineage4.9.1 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR11252612 | Other | La3;lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR23961549 | Other | La1.2 | None | SRR5341330 | Other | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR2693231 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR23961542 | Other | La1;lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR1180250 | Other | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | ERR2693257 | HR-TB | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR294266 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR6046253 | Sensitive | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | DRR188519 | Other | lineage4.4.2 | None | ERR752229 | Other | lineage4.5 | None | SRR3675441 | RR-TB | lineage4.9 | None | ERR4769427 | Other | La1.2 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR1169306 | Other | La3;lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None |
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