Rv0407 - c.546C>G
Drug resistance types
19 Sensitive
1 RR-TB
8 HR-TB
24 MDR-TB
46 Pre-XDR-TB
0 XDR-TB
12 Other
lineage Counts
| lineage | Count |
|---|---|
| 9 | |
| lineage4.1.1.3 | 2 |
| lineage2.2.1 | 83 |
| lineage2.2 | 1 |
| lineage4.5 | 1 |
| lineage4.1.1.3;lineage2.2.1 | 1 |
| M.caprae;M.bovis | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.9 | 1 |
| lineage4.3.2.1;lineage2.2.1 | 3 |
| lineage4 | 3 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage4.3.3;lineage2.2.1 | 2 |
| lineage4.8.1;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 110 |
Geographic prevalence
Country level data for this variant is available for 32 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3797046 | HR-TB | None | ERR3287383 | MDR-TB | lineage4.1.1.3 | pe | ERR3283055 | HR-TB | None | ERR4011051 | Pre-XDR-TB | lineage2.2.1 | None | ERR4010972 | Sensitive | lineage2.2.1 | None | ERR4011057 | Pre-XDR-TB | lineage2.2.1 | None | ERR4011086 | Pre-XDR-TB | lineage2.2.1 | None | ERR4011061 | Pre-XDR-TB | lineage2.2.1 | None | ERR4011063 | Pre-XDR-TB | lineage2.2.1 | None | ERR4011077 | MDR-TB | lineage2.2.1 | None | ERR4011075 | Pre-XDR-TB | lineage2.2.1 | None | ERR4011058 | MDR-TB | lineage2.2.1 | None | ERR4011065 | Pre-XDR-TB | lineage2.2.1 | None | ERR4011076 | MDR-TB | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4423531 | MDR-TB | lineage2.2.1 | None | ERR4423530 | MDR-TB | lineage2.2.1 | None | ERR752229 | Other | lineage4.5 | None | ERR4811493 | HR-TB | None | ERR1873560 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911611 | Pre-XDR-TB | lineage2.2.1 | za | ERR3340710 | MDR-TB | lineage4.1.1.3;lineage2.2.1 | za | SRR5341330 | Other | M.caprae;M.bovis | None | ERR8975714 | Pre-XDR-TB | lineage2.2.1 | None | ERR1750934 | Sensitive | lineage2.2.1 | None | ERR1750917 | Sensitive | lineage2.2.1 | za | ERR1750918 | Sensitive | lineage2.2.1 | za | ERR1750933 | Sensitive | lineage2.2.1 | za | ERR8975774 | MDR-TB | lineage2.2.1 | None | ERR1873556 | Pre-XDR-TB | lineage2.2.1 | za | ERR7911553 | Pre-XDR-TB | lineage2.2.1 | za | ERR7911652 | MDR-TB | lineage2.2.1 | za | ERR4813420 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR7911615 | Pre-XDR-TB | lineage2.2.1 | za | ERR6359045 | Other | None | ERR7911619 | Pre-XDR-TB | lineage2.2.1 | za | ERR7911557 | Pre-XDR-TB | lineage2.2.1 | za | SRR2101667 | Sensitive | lineage2.2.1 | None | ERR2515371 | Pre-XDR-TB | lineage2.2.1 | za | ERR7911539 | Pre-XDR-TB | lineage2.2.1 | za | SRR2101360 | MDR-TB | lineage4.1.2.1 | None | ERR1873447 | Pre-XDR-TB | lineage2.2.1 | za | ERR4818536 | Other | lineage4.9 | None | ERR1633836 | Other | lineage4.3.2.1;lineage2.2.1 | za | ERR7911542 | Pre-XDR-TB | lineage2.2.1 | za | ERR1633895 | Sensitive | lineage2.2.1 | za | ERR7911664 | Pre-XDR-TB | lineage2.2.1 | za | ERR2515527 | Sensitive | lineage2.2.1 | za | ERR4819462 | Other | lineage4 | None | ERR2515848 | Sensitive | lineage2.2.1 | None | ERR1873470 | Pre-XDR-TB | lineage2.2.1 | za | ERR7911547 | Pre-XDR-TB | lineage2.2.2;lineage2.2.1 | za | ERR1873474 | Pre-XDR-TB | lineage2.2.1 | za | ERR7911579 | Pre-XDR-TB | lineage4.3.3;lineage2.2.1 | za | ERR1873509 | Pre-XDR-TB | lineage2.2.1 | za | ERR7911526 | Pre-XDR-TB | lineage2.2.1 | za | ERR2660450 | MDR-TB | lineage2.2.1 | None | ERR7911548 | Pre-XDR-TB | lineage2.2.1 | za | ERR1873562 | Pre-XDR-TB | lineage2.2.1 | za | ERR2660475 | Sensitive | lineage2.2.1 | None | ERR2660538 | Sensitive | lineage2.2.1 | None | ERR279594 | Sensitive | lineage2.2.1 | None | ERR7911653 | Pre-XDR-TB | lineage2.2.1 | za | SRR16156799 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045217 | Other | lineage4 | None | ERR8975808 | Pre-XDR-TB | lineage2.2.1 | None | ERR279532 | Other | lineage4.3.2.1;lineage2.2.1 | None | ERR4829277 | MDR-TB | lineage2.2.1 | None | ERR495125 | Sensitive | lineage2.2.1 | None | ERR4830353 | Other | None | SRR5341313 | HR-TB | None | SRR5341432 | HR-TB | lineage4 | None | SRR6981923 | Sensitive | lineage2.2.1 | None | ERR4831117 | HR-TB | None | ERR4831536 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975031 | MDR-TB | lineage2.2.1 | None | ERR4831584 | MDR-TB | lineage2.2.1 | None | ERR4831535 | Pre-XDR-TB | lineage2.2.1 | None | ERR5987342 | Sensitive | lineage2.2.1 | None | SAMEA2535152 | RR-TB | lineage2.2.1 | sz | SRR3675501 | HR-TB | None | SRR15723133 | Other | lineage2.2.1 | None | SRR16156774 | MDR-TB | lineage2.2.1 | None | ERR495063 | Other | lineage4.3.2.1;lineage2.2.1 | None | ERR8975912 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156733 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034644 | Pre-XDR-TB | lineage2.2.1 | None | ERR1023465 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034637 | Pre-XDR-TB | lineage2.2.1 | None | DRR188820 | Sensitive | lineage2.2.1 | None | DRR189121 | Sensitive | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034958 | Sensitive | lineage2.2.1 | za | ERR1034652 | Other | None | ERR10748114 | Pre-XDR-TB | lineage4.8.1;lineage2.2.1 | None | ERR10748116 | MDR-TB | lineage2.2.1 | None | ERR10748099 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748133 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748152 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748288 | MDR-TB | lineage2.2.1 | None | ERR10748166 | MDR-TB | lineage2.2.1 | None | ERR10748240 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748299 | MDR-TB | lineage2.2.1 | None | ERR10748382 | MDR-TB | lineage2.2.1 | None | ERR10748310 | MDR-TB | lineage2.2.1 | None | ERR10748349 | MDR-TB | lineage4.3.3;lineage2.2.1 | None | ERR10748379 | MDR-TB | lineage2.2.1 | None | ERR10748502 | Pre-XDR-TB | lineage2.2.1 | None | ERR1452613 | Sensitive | lineage2.2.1 | None |
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