Rv3596c - c.1104G>C


Drug resistance types
8 Sensitive 6 RR-TB 18 HR-TB 16 MDR-TB 3 Pre-XDR-TB 2 XDR-TB 44 Other
lineage Counts
lineage Count
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.9 2
lineage4.9 28
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La1.7;M.canetti;lineage4.9 4
M.canetti;lineage2.2 2
lineage4.6.4;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La1.7;lineage4.9 6
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage2.2.1 6
La2;lineage2.2 1
lineage4.2.2.2 1
M.canetti;lineage2.2.2;lineage6.2 2
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.9;lineage6.3 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
lineage2.2 2
M.canetti;lineage4.6.4;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage2.2.1.2;lineage7 1
lineage4.5 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.8 3
lineage4.9;lineage9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.1.2.1 2
lineage1.1.2 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.9;lineage7 1
M.canetti;lineage4.2 1
La1.2.BCG 1
lineage1.1.1 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.7 2
lineage2.2.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La2;lineage4.9 1
lineage4.3.2.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 97
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR6045399 Other M.canetti;lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR176751 Other lineage4.9 None
ERR4769452 Other lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR6045217 Sensitive lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR10315558 Sensitive lineage2.2.1 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR9119669 HR-TB lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR3675446 RR-TB lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR3797047 MDR-TB lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR6832249 Sensitive lineage2.2.1 None
SRR6044835 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR6046878 Other lineage4.9 None
ERR6866807 Other lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR752229 Other lineage4.5 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR6045053 Other lineage4 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR6045548 Sensitive lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR4812763 Other lineage2.2.1 None
SRR8380944 Sensitive lineage1.1.2 None
ERR3283021 HR-TB lineage4.9 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR6359082 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR11662690 HR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR3675222 Other La1.7 None
ERR4808964 RR-TB lineage2.2.1 None
SRR3675270 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR12142339 HR-TB lineage2.2.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4821143 Other lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR6046046 Other lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR4830353 Other La1.7 None
SRR6046492 Other lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR6046593 Other lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None