lineage | Count |
---|---|
lineage4.9 | 45 |
La1.7;lineage4.9 | 6 |
lineage4.3.4.2 | 1 |
lineage2.2 | 4 |
La1.7;M.canetti;lineage4.9 | 2 |
La1.8.1 | 3 |
lineage1.1.1 | 1 |
lineage2.2.1.2;lineage7 | 1 |
La2;lineage2.2 | 1 |
lineage4.3.1;lineage4.9;lineage6 | 1 |
La1.7 | 2 |
lineage2.2.1 | 5 |
La1.7;lineage4.3.4.1 | 1 |
lineage3 | 2 |
lineage4.9;lineage7 | 1 |
La1.7;lineage4.2 | 1 |
lineage4.9;lineage6.3 | 1 |
lineage4.9;lineage6.1.3 | 1 |
lineage4 | 2 |
lineage4.5 | 1 |
lineage4.3.4 | 1 |
lineage4.8 | 2 |
La2;lineage4.9 | 1 |
lineage1;lineage4.9 | 1 |
La1.2;La1.8.1 | 1 |
La1.7.1;lineage4.9 | 1 |
lineage6.1.2 | 1 |
lineage4.1.2.1 | 2 |
La1.7.1;La1.7.X-unk4 | 1 |
spoligotype | Count |
---|---|
None | 93 |
ID | Drug resistance | Lineage | Country iso2 | ERR1034634 | HR-TB | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR5431730 | Other | La1.8.1 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR176651 | Other | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR3797080 | Sensitive | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR4830353 | Other | La1.7 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR1023509 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR6359082 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR6046878 | Other | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4798823 | HR-TB | lineage4 | None | ERR752229 | Other | lineage4.5 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR6045053 | Other | lineage4 | None | SRR6046046 | Other | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR3797019 | Other | La1.8.1 | None | ERR4769450 | Other | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | SRR28351584 | HR-TB | lineage2.2.1 | None | SRR3675270 | Other | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR4799025 | Other | lineage4.8 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR14782405 | HR-TB | lineage4.9 | None |
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