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SRA data
Rv3596c
- c.780C>T
Drug resistance types
23 Sensitive
3 RR-TB
24 HR-TB
6 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
30 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
28
lineage4.8
7
lineage2.2.1
6
lineage1.1.1
6
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
4
lineage3
3
La1.6;La3;lineage4.9
2
La1.8.1
2
lineage4.2;lineage4.6.3;lineage4.9.1
2
La1;lineage4.9
2
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
87
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR067699
Sensitive
La1;lineage2;lineage4.9
None
ERR1023502
MDR-TB
lineage2;lineage4
None
ERR1034634
HR-TB
lineage4.9
None
ERR108471
HR-TB
lineage4.9
None
ERR133825
HR-TB
La1;lineage4.9
None
ERR2446566
Other
lineage4.9
None
ERR2660539
Other
lineage4.9
None
ERR2693230
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
None
ERR2693231
Other
La1.6;La3;lineage4.6.4;lineage4.9
None
ERR2693245
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
None
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