Rv3596c - c.780C>T
Drug resistance types
15 Sensitive
3 RR-TB
23 HR-TB
5 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 4 |
| 24 | |
| lineage2.2.1 | 8 |
| lineage4.1.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4 | 12 |
| La1.2 | 1 |
| La1.3 | 2 |
| lineage4.9;La1.3 | 1 |
| lineage1.1.2 | 1 |
| lineage1.1.1 | 6 |
| lineage4.5 | 1 |
| lineage6 | 1 |
| lineage1.2.1.2 | 1 |
| La1.8.1 | 2 |
| lineage4.9 | 11 |
| lineage4.3.2.1 | 1 |
| La1.4 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage3 | 2 |
| lineage4.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 86 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9971122 | MDR-TB | lineage4.8 | None | ERR4831117 | HR-TB | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR4829819 | Sensitive | lineage4.8 | it | SRR8217918 | HR-TB | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR067699 | HR-TB | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1034634 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR4769452 | HR-TB | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797061 | Other | None | ERR3283055 | HR-TB | None | ERR3797046 | HR-TB | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769450 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769516 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4811493 | HR-TB | None | ERR4830212 | Sensitive | lineage1.1.1 | vn | SRR10808399 | Sensitive | lineage4 | None | ERR752229 | Other | lineage4.5 | None | ERR9787336 | Other | lineage6 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR9119273 | Sensitive | lineage1.1.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR11462861 | Other | La1.8.1 | None | SRR1175473 | Other | lineage4.9 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR14801749 | Sensitive | None | SRR26399382 | HR-TB | lineage1.1.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR4815310 | Other | None | ERR4814639 | HR-TB | lineage4 | None | ERR4814690 | Sensitive | lineage2.2.1 | None | SRR3675270 | HR-TB | None | ERR4815550 | Other | lineage4 | None | SRR3675510 | Other | None | SRR26399712 | Sensitive | lineage1.1.1 | None | SRR3675234 | Other | None | ERR4816470 | Other | lineage3 | None | SRR3675571 | HR-TB | None | ERR216965 | HR-TB | lineage4.9 | None | ERR2446566 | Other | lineage4.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4816852 | Other | lineage4.9 | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5431730 | Other | La1.8.1 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR2693232 | Other | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR2693231 | Other | None | ERR2660539 | Other | lineage4.9 | None | SRR6045480 | Other | lineage4.1.1 | None | ERR2693230 | Other | None | ERR2693257 | Other | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR2693254 | Other | None | ERR2693227 | Other | lineage4.9 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045053 | Other | None | SRR6046210 | Other | lineage4 | None | SRR6045264 | Sensitive | lineage2.2.1 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046492 | Other | None | SRR6046878 | HR-TB | lineage4 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045158 | Other | lineage4.9 | None | SRR6046046 | Other | None | ERR4829511 | Sensitive | lineage4.8 | it |
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