Rv1484 - c.624C>T
Drug resistance types
6 Sensitive
4 RR-TB
22 HR-TB
5 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 17 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La1.6;La3;lineage4.9 | 1 |
| lineage1.1.3.1 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
| La1.6;lineage4 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.2;La1.8.1 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.6.3;lineage4.9 | 2 |
| lineage4.5 | 1 |
| lineage4.8 | 1 |
| La1.2.BCG | 1 |
| La2;lineage2.2 | 1 |
| La2;lineage4.9 | 1 |
| lineage1.2.1.2.1 | 1 |
| M.canetti;lineage4.9 | 2 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| lineage4.3.4.1 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 51 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341330 | Other | lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | SRR6797398 | Sensitive | lineage1.1.3.1 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR2693257 | HR-TB | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | SRR28351554 | Other | La1.6;lineage4 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR2693231 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR6797791 | Sensitive | lineage1.1.3.1 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6044875 | Other | lineage4.9 | None | ERR11488822 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR3256260 | Sensitive | lineage1.2.1.2.1 | ph | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR3675234 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR3283032 | Other | lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None |
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