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SRA data
Rv1484
- c.624C>T
Drug resistance types
15 Sensitive
2 RR-TB
15 HR-TB
5 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
22
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
4
M.canetti;lineage4.9
3
lineage4.6.3;lineage4.9
2
lineage1.1.3.1
2
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
2
La1.6;La3;lineage4.9
1
La1.2;La1.8.1
1
lineage4.4.1.2
1
lineage4.9;lineage7
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
57
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR1063839
MDR-TB
La2;lineage2.2
None
ERR1063857
MDR-TB
La2;lineage4.9
None
ERR108471
HR-TB
lineage4.9
None
ERR11252558
Other
lineage4.6.3;lineage4.9
None
ERR11465353
Sensitive
lineage4.3.4.1
None
ERR11488822
Pre-XDR-TB
lineage2.2.1;lineage4.1.2.1
None
ERR2693230
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
None
ERR2693231
Other
La1.6;La3;lineage4.6.4;lineage4.9
None
ERR2693245
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
None
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