EBG00000313339 - n.2589G>A
Drug resistance types
15 Sensitive
0 RR-TB
17 HR-TB
7 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 29 |
| La1.8.1 | 3 |
| lineage4.5 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.9;lineage7 | 3 |
| lineage4.3.4.2 | 1 |
| lineage2.2 | 3 |
| lineage4.1.2.1 | 3 |
| lineage4.3.3 | 2 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage2.2.1 | 6 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage2.1;lineage4.9 | 2 |
| lineage3.1.1 | 2 |
| lineage4.3.4.2.1 | 4 |
| La3;lineage4.3.4 | 1 |
| lineage6.1.3 | 1 |
| lineage4.1.2 | 1 |
| La1;lineage4.9 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.8 | 2 |
| lineage4.9;lineage6.1.3 | 1 |
| La3;lineage4.9 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.2 | 1 |
| M.canetti;lineage1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 78 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3283055 | HR-TB | lineage4.9 | None | SRR1791725 | Other | La1.8.1 | None | SRR5431730 | Other | La1.8.1 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR387051 | Other | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR192070 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR9786663 | Other | lineage4.3.4.2 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR10680010 | MDR-TB | lineage4.1.2.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR9285816 | Sensitive | lineage4.3.3 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6046878 | Other | lineage4.9 | None | SRR3743401 | MDR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045053 | Other | lineage4 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR12882374 | Sensitive | lineage3.1.1 | None | ERR212123 | Other | lineage4.9 | None | ERR161184 | Sensitive | lineage4.3.4.2.1 | None | ERR126603 | Sensitive | lineage4.3.3 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR4769452 | Other | lineage4.9 | None | ERR323048 | Sensitive | lineage4.9 | None | ERR4188202 | Other | La1.8.1 | None | ERR245740 | Sensitive | lineage4.1.2 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR181906 | Sensitive | lineage3.1.1 | mw | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR3742667 | Sensitive | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR4769427 | Other | La1.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR473279 | Other | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | ERR161037 | Other | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR037501 | Sensitive | lineage4.3.4.2.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None |
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