Rv3793 - c.1209C>G


Drug resistance types
11 Sensitive 1 RR-TB 57 HR-TB 8 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 50 Other
lineage Counts
lineage Count
La3;lineage2.1;lineage4.9 1
lineage2.2.1 5
lineage4.9 58
La1.7.X-unk4;lineage4.9 1
La2;lineage2.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4 2
La2;lineage4.9 2
lineage2.1;lineage4.9 2
La1.6;La3;lineage4.9 1
La2;lineage4.9;lineage9 1
lineage4.1.2.1 2
lineage2.2 4
1
La1.7;M.canetti;lineage4.9 1
lineage1.2.1.2 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.7;lineage4.9;lineage7 1
lineage4.8 2
La3;lineage4.9 3
M.canetti;lineage1 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.7.1;lineage4.9 1
lineage4.4.1.2 1
lineage4.9;lineage7 2
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.2;lineage4.9 1
lineage4.9;lineage6.3 1
lineage4.9;lineage6.1.3 1
lineage4.5 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
M.canetti;lineage4.9;lineage9 1
lineage4.3.1;lineage4.9;lineage6 1
La1.7;lineage4.9 3
lineage3 2
La1.6;La3;lineage4.6.4;lineage4.9 1
M.canetti;lineage4.9 1
lineage2.2.2 1
lineage4.9;lineage9 2
La1.7;lineage3.1;lineage4 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage2.2.1.1 1
La1;lineage4.9 1
lineage4.3.2;lineage4.9 1
lineage2.1;lineage4.9;lineage7 1
lineage2.2.1.2;lineage7 1
spoligotype Counts
spoligotype Count
None 129
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
ERR387051 Other lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR5535933 Other lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6045053 Other lineage4 None
ERR4820773 HR-TB lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR1169249 Other lineage4.9 None
SRR29096276 Sensitive lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR29096425 Sensitive lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR3283032 Other lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR29097023 Sensitive lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR4816466 HR-TB lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR29017081 Sensitive lineage4.9 None
SRR6046485 Other lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR987722 MDR-TB None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR6046878 Other lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR3675270 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR736848 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR736856 Sensitive lineage4.9 None
ERR2446566 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR29050859 Other lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR29096107 Sensitive lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR4769452 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR6046382 Sensitive lineage2.2.1 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4819241 Other lineage4.9 None
ERR752229 Other lineage4.5 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR20969708 HR-TB lineage2.2 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR6046046 Other lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR9896144 Other lineage3 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR20969731 Other lineage2.2.1 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR9786444 Sensitive lineage4.8 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3797015 HR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR4769450 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR212138 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR176751 Other lineage4.9 None
SRR6079962 HR-TB lineage2.2.1.1 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR212033 Other lineage4.9 None
ERR181824 HR-TB lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR4819422 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
ERR6866807 Other lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR4818929 HR-TB lineage4.9 None