Rv3793 - c.1209C>G
Drug resistance types
7 Sensitive
1 RR-TB
93 HR-TB
3 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
34 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 6 |
| 72 | |
| lineage1.2.1.2 | 1 |
| lineage3 | 2 |
| lineage2.2 | 6 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.3 | 1 |
| lineage4 | 22 |
| lineage4.9 | 17 |
| lineage4.1 | 1 |
| lineage2.2.1.1 | 1 |
| La2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4;lineage3.1 | 1 |
| La1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.5 | 1 |
| lineage4.8 | 1 |
| lineage4.6.1.1 | 1 |
| La3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 141 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1174897 | HR-TB | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR14782405 | HR-TB | None | SRR17658565 | Other | lineage3 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR176568 | Other | lineage4.3 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR176751 | HR-TB | None | ERR176778 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3675270 | HR-TB | None | SRR20970016 | Other | lineage2.2 | None | SRR3675234 | Other | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675456 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176643 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR181887 | HR-TB | None | SRR3675510 | Other | None | ERR212125 | HR-TB | lineage4 | None | ERR212033 | HR-TB | None | SRR3675555 | HR-TB | None | ERR2446566 | Other | lineage4.1 | None | ERR4816466 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR4816656 | HR-TB | None | SRR5341373 | HR-TB | lineage4 | None | ERR4818929 | HR-TB | None | ERR4818607 | Sensitive | lineage4.9 | None | SRR5341313 | HR-TB | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341315 | Sensitive | None | ERR6359082 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR2693232 | Other | lineage4.9 | None | SRR5341456 | Other | None | SRR5341470 | HR-TB | None | ERR2693231 | Other | None | ERR2693230 | Other | None | ERR2693257 | Other | None | ERR2693254 | Other | None | SRR5535933 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045053 | Other | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6046046 | Other | None | SRR6046299 | HR-TB | None | ERR294266 | HR-TB | None | SRR6046492 | Other | None | SRR6046644 | HR-TB | None | ERR4831117 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR502524 | HR-TB | La2 | None | ERR323039 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323045 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323053 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR1063862 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3283024 | Other | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR108471 | HR-TB | lineage4 | None | ERR3283025 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797024 | Other | lineage4.9 | None | ERR3797015 | HR-TB | None | ERR405209 | Sensitive | lineage4 | None | ERR3797044 | Other | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797046 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797061 | Other | None | ERR387051 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR473332 | Other | lineage4 | None | ERR4769452 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR736839 | Other | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736835 | HR-TB | None | ERR4811493 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR736848 | HR-TB | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR736865 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR9119669 | HR-TB | None | ERR752229 | Other | lineage4.5 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR987722 | HR-TB | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1167384 | Other | lineage4 | None | ERR9896144 | Other | lineage3 | None | SRR1169306 | Other | None | SRR1169249 | Other | La3 | None | SRR1172310 | HR-TB | None |
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