Rv3244c - c.-333T>G
Drug resistance types
4 Sensitive
10 RR-TB
64 HR-TB
16 MDR-TB
2 Pre-XDR-TB
2 XDR-TB
86 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 8 |
| lineage2.1;lineage4.9 | 12 |
| lineage2.1 | 3 |
| lineage4.8 | 2 |
| lineage4.9 | 56 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| lineage4.1.2.1 | 7 |
| lineage2.2 | 3 |
| 14 | |
| lineage4.5 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 9 |
| La3;lineage2.1;lineage4.9 | 2 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La2;lineage2.2 | 1 |
| La3;lineage4.9 | 9 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.3.4.1 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage1.1.1 | 1 |
| lineage4.1.3 | 2 |
| lineage4.1.2 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage6.1.3 | 1 |
| lineage4.1.1.1 | 2 |
| La3;lineage4 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La1.7;lineage4.9 | 4 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.2 | 2 |
| lineage4.9;lineage6.3 | 2 |
| lineage2.1;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.8 | 1 |
| lineage6.3.1 | 1 |
| lineage4.9;lineage7 | 2 |
| La1.2.BCG;La1.8.1 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4 | 4 |
| lineage4.1;lineage4.8 | 2 |
| La3;lineage2 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage3 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 184 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR2229542 | Other | lineage4.8 | None | SRR1180137 | RR-TB | lineage2.2.1 | None | ERR4769452 | Other | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR161037 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR1063896 | HR-TB | None | ERR4815604 | Other | None | ERR9117709 | Other | None | ERR234659 | HR-TB | None | ERR9787197 | Other | None | SRR3675236 | Other | None | ERR137286 | Other | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | SRR3675275 | Other | lineage4.9 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR6046878 | Other | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR4817735 | Other | lineage4.8 | None | ERR6866639 | HR-TB | lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | ERR3283031 | Other | La3;lineage4.9 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR323066 | HR-TB | lineage4.9 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR4797184 | HR-TB | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4818347 | Other | lineage4.1.2 | None | SRR5341467 | Other | lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9787165 | Other | lineage6.1.3 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR3283021 | MDR-TB | lineage4.9 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR9786604 | Other | None | SRR6789626 | Other | None | SRR18213713 | HR-TB | None | ERR4816999 | Other | None | ERR4797474 | Other | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR4817893 | Other | La3;lineage4.8 | None | SRR5341330 | Other | lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR387051 | RR-TB | lineage4.9 | None | SRR6045548 | Other | lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR124636 | HR-TB | lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR3797063 | Other | La3;lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR473332 | Other | lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR4769450 | Other | lineage4.9 | None | ERR9786601 | Other | lineage4.1.2.1 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675508 | MDR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR4818615 | Sensitive | None | ERR9786843 | Other | None | ERR4407463 | HR-TB | None | ERR4817060 | Other | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR4800341 | HR-TB | lineage3 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | SRR6046046 | Other | lineage4.9 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR3797069 | Other | lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR3675214 | Other | lineage4.9 | None | ERR3283044 | Other | lineage4 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR3273109 | HR-TB | lineage4 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR3283014 | Other | La3;lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR3283042 | HR-TB | lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None |
|---|
