Rv1484 - c.-655T>C


Drug resistance types
16 Sensitive 7 RR-TB 86 HR-TB 45 MDR-TB 2 Pre-XDR-TB 2 XDR-TB 108 Other
lineage Counts
lineage Count
M.canetti;lineage4.9 2
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage4.9 31
lineage4 2
La3;lineage4.9 10
lineage2.1;lineage4.3.2;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage4.1.1.1 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9 15
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.1.3 2
M.canetti;lineage2.1;lineage4.9 23
lineage3 3
La3 2
lineage2.2.1.1 2
lineage2.1 3
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage2.2.1 6
La1.7.1;La1.7.X-unk4;lineage7 1
lineage2.1;lineage4.9;lineage6.3 10
M.canetti;lineage2.1;lineage6.3 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage3.1 1
lineage4.2;lineage4.8.1;lineage4.9 1
La1.7;lineage4.2 1
M.canetti;lineage4.2 1
La3;M.canetti;lineage2.1;lineage4.9 12
La1.2.BCG 1
La3;M.canetti;lineage3.1 1
14
La1.7;M.canetti;lineage4.9 4
lineage2.1;lineage4.1.1.1;lineage6.3 2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;lineage4 1
lineage4.9;lineage6.3 9
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
La1.8.1 1
lineage4.2;lineage4.9 1
La1.7;lineage4.9 5
lineage3.1.2.1;lineage3.1.2.2 1
La3;lineage2.1;lineage4.9 3
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage6.3.1 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La3;lineage2 1
M.canetti;lineage2.2.2;lineage6.2 2
La1.7.X-unk4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage6.3 1
lineage4.1.2.1 4
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage2.2.1;lineage6.3 1
lineage2.1;lineage4.1.4;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage5.2 2
lineage4.1.2.1.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage2.1;lineage2.2;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 2
lineage1.2.1.2 1
La1.7.1 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4.5 1
La3;M.canetti;lineage4.9 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.8 1
lineage4.3.4.2.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.1.1.3 1
lineage2.2.2 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage1.2.2.2 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.6.2.2 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
M.canetti;lineage2.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
M.canetti;lineage4.2;lineage4.9 2
La3;M.canetti;lineage2.2.1 1
La2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 266
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR736856 Sensitive lineage4.9 None
ERR2027263 Other lineage4 None
SRR6045219 HR-TB lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR3804169 HR-TB lineage4.1.3 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4800341 Other lineage3 None
SRR1172728 RR-TB La3 None
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
ERR176643 Other La3;lineage4.9 None
ERR702406 Other lineage2.1 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR1180172 Other lineage2.2.1 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
SRR7496472 Other lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786843 Other None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR1172857 Other None
ERR9787197 Other None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR28119805 Other lineage4.9 None
ERR234659 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
SRR29231479 RR-TB lineage4.9 None
SRR28351554 Sensitive La1.6;lineage4 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1196566 Other lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1196583 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR9787139 Other lineage6.3.1 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3797048 Other La3;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1169306 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR926163 Other lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR926159 Sensitive lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4872094 MDR-TB lineage5.2 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR971389 Sensitive lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR1172817 Other La3 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR176751 Other lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1180147 Other lineage2.2.1.1 None
SRR1184294 Other lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR502912 Other lineage2.2.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR1184381 MDR-TB None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR987722 MDR-TB None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR7240492 HR-TB La1.7.1 None
ERR926165 Sensitive lineage4.9 None
SRR3675572 Other None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR2693252 Sensitive lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR752229 Other lineage4.5 None
ERR3468607 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR11252736 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6045053 Other lineage4 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR1162740 Other lineage4.1.2.1 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1184312 Other lineage2.2.1 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR14801749 HR-TB lineage4.9 None
ERR4816999 Other None
SRR6789626 Other None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR926161 Sensitive lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR990545 Other lineage3 None
ERR4797201 Other lineage1.2.2.2 None
ERR4816466 HR-TB lineage4.9 None
SRR28119777 Other lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9117709 Other None
ERR9786611 HR-TB lineage4.1.3 None
SRR1173400 Other lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR3797070 Other lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR3675221 Other lineage4.9 None
ERR212001 HR-TB None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR4407463 HR-TB None
SRR1172951 Other lineage4.9 None
SRR1196768 MDR-TB None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR10808668 Sensitive lineage2.2.1 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR4821053 RR-TB lineage3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None