Rv3596c - c.2142C>T


Drug resistance types
39 Sensitive 1 RR-TB 24 HR-TB 3 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 34 Other
lineage Counts
lineage Count
lineage4.9 65
lineage4 3
lineage1.1.2 2
La1;lineage4.9 1
lineage4.3.3 1
lineage4.6.2.2 1
lineage4.9;lineage6.1.3 1
La1.7;lineage4.9;lineage6 1
lineage4.5 1
La1.7;lineage4.9;lineage7 3
lineage2.2.1 3
lineage4.3.1;lineage4.9;lineage6 1
lineage1.2.1.1 1
lineage4.3.2.1 1
lineage4.3.4.2.1 1
lineage1.1.3.1 1
La1;lineage4.1.2 1
lineage3.1 1
lineage4.8;lineage4.9 2
lineage4.1.2 1
La1.8.1 1
lineage6.1.3 1
lineage4.1.1.2 1
lineage4.9;lineage7 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage3;lineage4.9 1
lineage2.2.1;lineage4 1
lineage4.1.1.3;lineage4.9 2
1
spoligotype Counts
spoligotype Count
None 102
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341400 Sensitive lineage4.9 None
SRR6045053 Other lineage4 None
SRR6046046 Other lineage4.9 None
SRR5341310 Other lineage1.1.2 None
ERR702405 Sensitive lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR6832261 HR-TB lineage4.3.3 None
SRR12416842 HR-TB lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR5341387 Other lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR752229 Other lineage4.5 None
ERR4811030 Sensitive lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR4831620 MDR-TB lineage2.2.1 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR323107 Sensitive lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
SRR3675235 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR124636 Sensitive lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR1035122 Sensitive lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR3675246 Other lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR28351442 HR-TB lineage3.1 None
ERR779852 Sensitive lineage4.9 None
SRR5341298 Sensitive lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR28351339 MDR-TB lineage4 None
ERR4797474 Sensitive lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
ERR137286 Other lineage4.9 None
SRR1159378 Other lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR1791747 Other La1.8.1 None
ERR6866410 Sensitive lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341300 HR-TB lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR9787256 Other lineage6.1.3 None
SRR16156817 Other lineage4.9 None
ERR4818252 Sensitive lineage4.1.1.2 None
SRR6511621 Sensitive lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR751326 Other lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR5341396 Other lineage3;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR28351342 HR-TB lineage2.2.1;lineage4 None
ERR3283055 HR-TB lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR323066 Sensitive lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR1063896 Sensitive None
ERR502511 Sensitive lineage4.9 None