Rv1484 - c.174C>G
Drug resistance types
11 Sensitive
0 RR-TB
13 HR-TB
5 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
22 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.2.BCG | 1 |
| lineage2.2 | 2 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| 2 | |
| lineage4.1;lineage4.8 | 2 |
| La3;lineage4.9 | 3 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.9 | 8 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| La1.7;lineage4.9;lineage7 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.6.2.2 | 3 |
| lineage4.9;lineage7 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage1.1.1 | 1 |
| La1.6 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.5 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage6.3.1 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage4.1.2.1 | 1 |
| La3;lineage1.1.2 | 1 |
| La1.2;La1.8.1 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 51 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR4798262 | HR-TB | La1.2.BCG | None |
| SRR20970016 | Other | lineage2.2 | None |
| SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
| ERR234659 | Other | None | |
| ERR9786525 | Other | lineage4.1;lineage4.8 | None |
| SRR1167384 | Other | La3;lineage4.9 | None |
| SRR5341333 | Other | lineage2.1;lineage4.9 | None |
| SRR29096203 | Sensitive | lineage4.9 | None |
| ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None |
| ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
| SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None |
| ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
| SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None |
| SRR29096425 | Sensitive | lineage4.9 | None |
| SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None |
| ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
| ERR124636 | Sensitive | lineage4.9 | None |
| SRR6458423 | HR-TB | lineage2.2.1 | None |
| SRR6045399 | Other | M.canetti;lineage4.9 | None |
| SRR29097023 | Sensitive | lineage4.9 | None |
| SRR29096107 | Sensitive | lineage4.9 | None |
| ERR9786711 | Sensitive | lineage4.6.2.2 | None |
| ERR4831117 | HR-TB | lineage4.9;lineage7 | None |
| ERR9786645 | Other | lineage4.6.2.2 | None |
| SRR6046225 | Other | lineage4.9;lineage6.3 | None |
| SRR14066533 | Sensitive | lineage1.1.1 | None |
| ERR11268039 | Other | La1.6 | None |
| ERR9786843 | Other | None | |
| ERR3283055 | HR-TB | lineage4.9 | None |
| ERR3801503 | Sensitive | lineage4.6.2.2 | None |
| ERR3445504 | Other | lineage4.9;lineage6.1.3 | None |
| ERR752229 | Other | lineage4.5 | None |
| ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None |
| SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
| ERR9787139 | Other | lineage6.3.1 | None |
| ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None |
| SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
| ERR9786682 | Other | lineage4.1.2.1 | None |
| ERR9117721 | HR-TB | La3;lineage1.1.2 | None |
| SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
| SRR20969708 | HR-TB | lineage2.2 | None |
| SRR1165628 | Other | La3;lineage4.9 | None |
| ERR9786526 | Other | lineage4.1;lineage4.8 | None |
| SRR7240033 | Other | La1.2;La1.8.1 | None |
| ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None |
| ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
| ERR1035122 | Sensitive | lineage4.9 | None |
| ERR176643 | Other | La3;lineage4.9 | None |
| ERR3797046 | HR-TB | lineage4.9 | None |
| SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None |
| ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
