Rv0668 - c.1036A>C


Drug resistance types
34 Sensitive 66 RR-TB 150 HR-TB 32 MDR-TB 9 Pre-XDR-TB 0 XDR-TB 161 Other
lineage Counts
lineage Count
lineage3.1.2.1 1
lineage4;lineage1.1.2 1
lineage2.2.1 26
lineage4.1;lineage1 1
lineage4.8;La3 1
162
La1.8.1 4
lineage4.1 3
lineage3.1.3 1
lineage4.2.2.2 1
lineage4.1.1 3
lineage4.1.2 1
lineage4.9 118
lineage4.3.2.1 1
lineage4.1.1.3.1 1
lineage4;lineage1.1 1
lineage4.3.4.2.1 6
lineage4 11
lineage4.1.2.1 24
lineage4.9;lineage3.1.2.1 1
lineage3 10
lineage4.8 6
lineage3.1.1 1
lineage1.1 1
lineage4.2.1.1 1
lineage4.2.1 1
lineage3.1 4
lineage4.1.1.3 4
lineage4.4.2 2
La1 1
lineage4.6.2.2 3
lineage4.1.3 2
La1.2 2
lineage2 4
lineage2.2 6
lineage2.2.2 3
lineage4.7 1
lineage4.6.1.1 1
lineage4.1.2.1.1 1
lineage4.5 4
lineage4.3.2 2
lineage1.1.3.2 1
lineage1.1.2 1
lineage6 2
lineage6.3.1 1
lineage2.2.1.2 2
La3 1
lineage4.4.1.1 4
lineage4.2.2.1 1
lineage7;lineage2.2.1.2 1
lineage4.9;La3 1
lineage4.3.3 1
lineage6.3;lineage2.2.1 1
lineage6.3;lineage4.9;lineage2.1 1
lineage4.1.1.1 1
lineage3;lineage2.2.1 1
lineage4.3.4 1
lineage3;lineage2.1 1
lineage4.3 1
lineage4.1.3;lineage4.1.2.1;lineage1.1.2 1
spoligotype Counts
spoligotype Count
None 452
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4816717 RR-TB lineage3.1.2.1 None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4819068 Sensitive lineage4.1;lineage1 None
ERR4817893 Other lineage4.8;La3 None
SRR7496472 Other None
ERR1035162 Other None
ERR4818021 Other La1.8.1 None
ERR2446566 Other lineage4.1 None
ERR2513121 Sensitive lineage3.1.3 None
ERR2513470 Other lineage4.2.2.2 None
ERR3275196 Other lineage2.2.1 nl
ERR2229143 Other lineage4.1.1 None
ERR4818347 Other lineage4.1.2 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4818607 Sensitive lineage4.9 None
SRR4037885 Sensitive lineage4.3.2.1 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
ERR4819322 Other lineage4;lineage1.1 None
ERR4818624 Other lineage4.3.4.2.1 None
ERR4818615 Other None
SRR5007188 Other lineage4 None
ERR4820854 Other lineage4.1.2.1 None
ERR2513628 Other lineage4.1.2.1 None
ERR2514390 Sensitive lineage4.9;lineage3.1.2.1 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR2514125 Other lineage3 None
ERR2514327 HR-TB lineage4.8 None
ERR4819430 Sensitive lineage4.1.2.1 None
SRR5341418 Other None
SRR5341333 HR-TB None
ERR1035138 MDR-TB None
SRR5341302 HR-TB None
ERR4819910 Other lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
ERR4819781 Other lineage2.2.1 None
ERR4821053 Other lineage3 None
ERR6359082 Other lineage4.9 None
SRR5341330 HR-TB None
ERR2693238 HR-TB lineage4.9 None
ERR2446563 Other lineage2.2.1 nl
ERR2693231 Other None
ERR2693230 Other None
ERR2693239 HR-TB None
SRR6045519 HR-TB None
ERR4821143 RR-TB lineage4.9 None
ERR2693254 Other None
ERR2693257 Other None
SRR5535933 HR-TB None
ERR278594 HR-TB None
ERR2660539 Other lineage4.9 None
ERR2693227 Other lineage4.9 None
ERR4821195 Sensitive lineage4.9 None
SRR6045555 HR-TB None
SRR6046066 HR-TB None
SRR6044790 HR-TB None
SRR6046046 Other None
SRR6046133 HR-TB None
SRR6044855 Other lineage4.9 None
SRR6044983 Other lineage3.1.1 None
SRR6045952 HR-TB None
SRR6045053 Other None
SRR6045217 Other lineage4 None
SRR6046253 HR-TB lineage4.9 None
SRR6325442 HR-TB None
SRR6046225 HR-TB None
SRR6046362 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6325444 HR-TB None
SRR6046460 HR-TB None
SRR6325447 HR-TB None
SRR6046492 Other None
SRR6046514 HR-TB None
SRR6046594 HR-TB lineage4 None
SRR6046644 HR-TB None
SRR6046482 HR-TB None
SRR6325448 HR-TB None
SRR6046540 HR-TB None
SRR6046824 HR-TB None
ERR11466146 Other lineage4.3.4.2.1 None
SRR6046878 HR-TB lineage4 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR3077978 Other lineage1.1 None
SRR6397654 HR-TB lineage4.1.2.1 None
ERR4831117 HR-TB None
SRR6832178 HR-TB lineage4.2.1.1 None
ERR294248 HR-TB None
SRR6785227 Other lineage2.2.1 None
SRR6785268 Sensitive lineage4.2.1 None
SRR6789626 Other None
SRR6785413 Other lineage2.2.1 None
ERR502532 HR-TB None
ERR323034 HR-TB lineage3.1 None
ERR323036 HR-TB None
ERR502908 HR-TB lineage2.2.1 None
ERR502889 Other None
ERR5311087 Other La1.8.1 None
ERR5311081 HR-TB None
ERR5311099 HR-TB None
SRR7496517 Other None
ERR5311090 HR-TB None
SRR7496509 Other None
SRR7131023 Other lineage4.1.2.1 None
ERR323038 HR-TB None
SRR7585435 Other lineage4.9 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR7535086 Other None
ERR323043 HR-TB None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR323041 HR-TB None
ERR11465024 Other lineage4.1.1.3 None
ERR323054 HR-TB lineage3.1 None
ERR323055 HR-TB None
ERR323063 HR-TB None
DRR188519 Other lineage4.4.2 None
ERR067681 HR-TB None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR1023494 Sensitive lineage3 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR1035157 Other lineage4.9 None
ERR11465626 Sensitive lineage4.3.4.2.1 None
ERR4820586 Other lineage3 gb
ERR133986 HR-TB None
ERR3283010 Other La1 None
ERR3283024 Other None
ERR3283017 HR-TB None
ERR3283055 HR-TB None
ERR3283027 HR-TB None
ERR3283036 HR-TB None
ERR3283043 Other lineage4.9 None
ERR3283048 HR-TB lineage4.9 None
ERR3468544 HR-TB None
ERR3324329 HR-TB lineage4.1.1.3 None
ERR3439432 Other None
ERR3797014 Other None
ERR3797016 HR-TB None
ERR3804155 Other lineage4.1.2.1 None
ERR3797036 HR-TB None
ERR3797044 Other None
ERR3797061 Other None
ERR3797069 Other None
ERR3797083 HR-TB None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR3797017 Other None
ERR3797023 HR-TB La1.8.1 None
ERR3797046 HR-TB None
ERR3804169 HR-TB lineage4.1.3 None
ERR387051 HR-TB None
ERR4188350 HR-TB None
ERR403298 HR-TB lineage4 None
ERR4407452 Sensitive lineage3 None
ERR4769427 Other La1.2 None
ERR4407463 HR-TB None
ERR4769452 HR-TB None
ERR4769457 Other lineage4.9 None
ERR4769497 HR-TB La1.2 None
ERR4769450 HR-TB None
ERR4797588 MDR-TB lineage3 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4796351 MDR-TB lineage4.9 None
ERR4796577 MDR-TB None
ERR4799025 Pre-XDR-TB None
ERR4798406 HR-TB None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4799513 HR-TB lineage2.2 None
ERR4800341 Other lineage3 None
ERR4808964 RR-TB lineage2.2.1 None
ERR4811142 MDR-TB None
ERR4811022 HR-TB None
ERR4811105 HR-TB None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4810741 HR-TB None
ERR5336148 Other None
ERR4811493 HR-TB None
ERR6197031 Other lineage4.7 None
ERR6359045 HR-TB None
ERR6358755 Other lineage4.6.1.1 None
ERR6358837 HR-TB None
ERR736867 HR-TB None
ERR702406 HR-TB None
ERR736835 HR-TB None
ERR736839 Other None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR736874 HR-TB None
ERR752229 Other lineage4.5 None
ERR772255 MDR-TB lineage4.3.2 None
SRR21732954 Sensitive lineage4.9 None
ERR7821123 Other lineage1.1.3.2 None
ERR773806 Sensitive lineage2.2.1 None
ERR9117721 HR-TB lineage1.1.2 None
ERR176549 Other lineage4.3.4.2.1 None
ERR8976043 HR-TB None
ERR9117709 HR-TB None
ERR9786421 Other lineage4.1.2.1 None
ERR9117805 Other lineage4.3.2 None
ERR9786617 Other lineage4.1.1 None
ERR9786440 Other lineage4.1 None
ERR9786569 Other lineage4.8 None
ERR9786604 Other None
ERR9786627 Other lineage4.1.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR9786645 Other lineage4.6.2.2 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR9787165 Other lineage6 None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR069989 HR-TB lineage2 None
ERR9787139 Other lineage6.3.1 None
ERR9787336 Other lineage6 None
SRR069978 Pre-XDR-TB lineage2.2.2 None
SRR069981 HR-TB lineage2.2.2 None
ERR9787197 Other None
SRR1162740 Other lineage4.1.2.1 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR1165423 Other lineage4.1.2.1 None
SRR1165506 Other lineage4.1.2.1 None
SRR1165584 Other lineage4.1.2.1 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1167384 Other lineage4 None
SRR1167055 Other lineage4.1.2.1 None
SRR1169194 Other None
SRR1172817 HR-TB None
SRR1169306 Other None
SRR1172234 Other None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1169249 Other La3 None
SRR1172728 MDR-TB None
SRR1172844 MDR-TB lineage4.4.1.1 None
SRR1172857 MDR-TB None
SRR1173118 Other None
SRR1172951 Other None
SRR1173153 HR-TB None
SRR1173384 Other lineage4 None
SRR1173330 Pre-XDR-TB lineage4 None
SRR1173363 HR-TB None
SRR1173562 HR-TB lineage4 None
SRR1173400 Other None
SRR1173453 Other lineage4.4.1.1 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1173633 HR-TB lineage4.9 None
SRR1173788 Other None
SRR1175049 RR-TB None
SRR1175090 Other lineage4.9 None
SRR1173629 Other None
SRR1173706 Other lineage4.9 None
SRR1173767 HR-TB lineage4.4.1.1 None
SRR1173778 Other None
SRR1175074 MDR-TB None
SRR1180270 Other lineage2.2.1 None
SRR1181328 Other lineage2.2.1 None
SRR1181251 Other lineage2.2.1 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184294 HR-TB None
SRR1183145 Other lineage2.2.1 None
SRR1184346 HR-TB lineage3.1 None
SRR1184388 Other None
SRR1184381 MDR-TB None
SRR1184380 HR-TB None
SRR1196494 MDR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR13423544 Other lineage4.5 None
SRR1196566 HR-TB None
SRR1196677 HR-TB lineage2 None
SRR12416824 HR-TB None
SRR1196546 HR-TB None
SRR1196768 MDR-TB None
SRR12142339 HR-TB lineage2.2.1 None
SRR12142341 HR-TB None
SRR13423649 Sensitive lineage2.2.1 None
SRR13861146 Sensitive lineage4.9 None
SRR13861138 RR-TB lineage4.9 None
SRR13837647 Other lineage4.9 None
SRR13861140 MDR-TB lineage4.9 None
SRR13861149 RR-TB lineage4.9 None
SRR13861152 Sensitive lineage4.9 None
SRR13861168 RR-TB lineage4.9 None
SRR13861151 RR-TB lineage4.9 None
SRR13861154 RR-TB lineage4.9 None
SRR13861186 Other lineage4.9 None
SRR13861169 RR-TB lineage4.9 None
SRR13861170 RR-TB lineage4.9 None
SRR13861197 RR-TB lineage4.9 None
SRR13861218 RR-TB lineage4.9 None
SRR13861216 RR-TB lineage4.9 None
SRR13861200 Other lineage4.9 None
SRR13861199 RR-TB lineage4.9 None
SRR13861251 RR-TB lineage4.9 None
SRR13861222 RR-TB lineage4.9 None
SRR13861262 RR-TB lineage4.9 None
SRR13861267 Other lineage4.9 None
SRR13861261 Sensitive lineage4.9 None
SRR13861276 RR-TB lineage4.9 None
SRR13861277 RR-TB lineage4.9 None
SRR13861320 RR-TB lineage4.9 None
SRR13861284 RR-TB lineage4.9 None
SRR13861292 RR-TB lineage4.9 None
SRR13861310 RR-TB lineage4.9 None
SRR13861316 RR-TB lineage4.9 None
SRR13861338 Sensitive lineage4.9 None
SRR13861337 RR-TB lineage4.9 None
SRR13861321 RR-TB lineage4.9 None
SRR13861376 Other lineage4.9 None
SRR13861368 RR-TB lineage4.9 None
SRR13861375 Other lineage4.9 None
SRR13861341 RR-TB lineage4.9 None
SRR13861406 MDR-TB lineage4.9 None
SRR13861386 HR-TB lineage4.9 None
SRR13861385 Sensitive lineage4.9 None
SRR13861381 MDR-TB lineage4.9 None
SRR13861408 MDR-TB lineage4.9 None
SRR13861389 Other lineage4.9 None
SRR13861393 Sensitive lineage4.9 None
SRR13861451 RR-TB lineage4.9 None
SRR13861443 RR-TB lineage4.9 None
SRR13861424 RR-TB lineage4.9 None
SRR13861439 RR-TB lineage4.9 None
SRR13861450 RR-TB lineage4.9 None
SRR13861463 Other lineage4.9 None
SRR13861458 MDR-TB lineage4.9 None
SRR13861481 RR-TB lineage4.9 None
SRR13861474 Sensitive lineage4.9 None
SRR13861495 MDR-TB lineage4.9 None
SRR13861486 Other lineage4.9 None
SRR13861484 RR-TB lineage4.9 None
SRR13861488 RR-TB lineage4.9 None
SRR13861494 Other lineage4.9 None
SRR13861501 RR-TB lineage4.9 None
SRR13861570 Other lineage4.9 None
SRR13861503 Other lineage4.9 None
SRR13861500 RR-TB lineage4.9 None
SRR13861513 RR-TB lineage4.9 None
SRR13861528 HR-TB lineage4.9 None
SRR13861547 RR-TB lineage4.9 None
SRR13861561 RR-TB lineage4.9 None
SRR13861519 Other lineage4.9 None
SRR13861520 RR-TB lineage4.9 None
SRR13861524 RR-TB lineage4.9 None
SRR13861543 RR-TB lineage4.9 None
SRR13861549 RR-TB lineage4.9 None
SRR13861563 RR-TB lineage4.9 None
SRR13861571 RR-TB lineage4.9 None
SRR13861590 RR-TB lineage4.9 None
SRR13861585 RR-TB lineage4.9 None
SRR13861596 Other lineage4.9 None
SRR13861618 RR-TB lineage4.9 None
SRR13861603 RR-TB lineage4.9 None
SRR13861629 RR-TB lineage4.9 None
SRR13861631 RR-TB lineage4.9 None
SRR13861632 MDR-TB lineage4.9 None
SRR13861638 Sensitive lineage4.9 None
SRR13861686 RR-TB lineage4.9 None
SRR13861646 Other lineage4.9 None
SRR13861662 RR-TB lineage4.9 None
SRR13861650 Sensitive lineage4.9 None
SRR13861663 Sensitive lineage4.9 None
SRR13861701 RR-TB lineage4.9 None
SRR13861699 Sensitive lineage4.9 None
SRR13861729 RR-TB lineage4.9 None
SRR13861722 RR-TB lineage4.9 None
SRR1640750 HR-TB None
SRR13861730 Sensitive lineage4.9 None
SRR13861737 RR-TB lineage4.9 None
SRR14782405 HR-TB None
SRR16149129 MDR-TB lineage4.2.2.1 None
SRR16156804 RR-TB lineage4.9 None
SRR13861736 RR-TB lineage4.9 None
SRR15368973 Other None
SRR1791696 Other La1.8.1 None
SRR17658565 Other lineage3 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR18003019 Other lineage2.2.1 None
SRR18213713 HR-TB lineage4.5 None
SRR19303884 HR-TB None
SRR20969731 Other lineage2.2.1 None
SRR19304036 HR-TB None
SRR20969677 HR-TB lineage2 None
SRR26159043 Other lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR25827682 Other None
SRR24061597 Sensitive None
SRR26399973 Other lineage4.9;La3 None
SRR20970016 Other lineage2.2 None
ERR11081258 Other lineage4.8 None
SRR21732980 Other lineage4.3.3 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
SRR23961558 Other lineage6.3;lineage4.9;lineage2.1 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR4815604 HR-TB None
SRR25827497 Pre-XDR-TB lineage3;lineage2.2.1 None
ERR176793 Other lineage4.1.1 None
SRR3675464 HR-TB lineage4.1 None
SRR3675465 HR-TB None
SRR6325445 HR-TB None
SRR3675482 HR-TB None
ERR4815301 Other lineage4.4.2 None
ERR1035239 HR-TB None
ERR158583 HR-TB None
ERR161034 Other lineage4.3.4.2.1 None
ERR4814352 HR-TB lineage2.2.1 None
ERR161033 HR-TB None
SAMN02585910 Other lineage2.2.1 None
SRR3675502 Other None
ERR161039 Sensitive lineage4.3.4 None
SRR3675486 HR-TB None
SRR3601585 Pre-XDR-TB lineage2.2 None
ERR4814536 MDR-TB lineage3;lineage2.1 None
SRR3619764 Pre-XDR-TB lineage2.2 None
SRR3675232 Other lineage4.1.2.1 None
ERR181744 HR-TB None
SRR3675221 HR-TB None
ERR4812763 Other lineage2.2.1 None
SRR3675236 HR-TB None
SRR3675234 Other None
ERR176643 HR-TB None
ERR176568 Other lineage4.3 None
SRR3675280 HR-TB lineage4.9 None
SRR3675270 HR-TB None
ERR4815556 RR-TB lineage3 None
SRR3675311 Other None
ERR176751 HR-TB None
SRR3675383 HR-TB None
SRR3675456 HR-TB None
ERR2229542 Other lineage4.8 None
ERR4816999 Other None
SRR3675545 HR-TB None
ERR4816100 Sensitive lineage4.1.3;lineage4.1.2.1;lineage1.1.2 None
ERR2027263 Other lineage4 None
ERR212033 HR-TB None
ERR4816151 Other lineage4.8 None
ERR212001 HR-TB None
SRR3675550 Other None
SRR3675555 HR-TB None
ERR212123 Other None
ERR4817060 RR-TB None
SRR3675558 HR-TB None
SRR3675572 Other None
ERR4817069 RR-TB None
ERR2229198 MDR-TB lineage4.8 None
ERR2229197 Sensitive lineage4 None
ERR4816466 HR-TB None
ERR4816548 MDR-TB lineage4.5 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR216965 HR-TB lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR4816585 Other lineage2.2 None
SRR3742665 HR-TB None