Rv0668 - c.1041G>C
Drug resistance types
68 Sensitive
26 RR-TB
76 HR-TB
25 MDR-TB
12 Pre-XDR-TB
2 XDR-TB
66 Other
lineage Counts
| lineage | Count |
|---|---|
| 48 | |
| lineage4 | 34 |
| lineage4.9 | 81 |
| lineage4.3.1.1 | 1 |
| lineage2.2.1 | 18 |
| lineage4.1 | 2 |
| lineage4.6.1.1 | 2 |
| lineage4.7 | 1 |
| lineage4.4.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage3 | 15 |
| lineage2.2.2 | 2 |
| lineage2.2 | 6 |
| La1.7.X-unk4 | 1 |
| lineage4.1.2.1 | 8 |
| La1.8.1 | 2 |
| La1.3 | 6 |
| La1.2 | 3 |
| lineage4.9;La1.3 | 1 |
| lineage4.3.4 | 1 |
| lineage4.5 | 2 |
| lineage4.3.4.2.1 | 5 |
| lineage4.6.1.2 | 6 |
| lineage6 | 2 |
| lineage4.3.3 | 1 |
| lineage4.8 | 6 |
| La1.6 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage4.1.2 | 1 |
| lineage3.1 | 1 |
| lineage2.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage3.1.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 275 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046046 | Other | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046253 | HR-TB | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046492 | Other | None | ERR2851359 | Other | lineage4.9 | None | ERR4831117 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046616 | Other | lineage4.3.1.1 | None | ERR4872269 | XDR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR7496523 | Other | lineage4.7 | None | DRR188519 | Other | lineage4.4.2 | None | ERR323068 | Sensitive | lineage4.9 | None | SRR7535086 | Other | None | ERR323045 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR1023494 | Sensitive | lineage3 | None | DRR213597 | MDR-TB | lineage2.2.2 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063855 | Other | lineage4 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR1063857 | HR-TB | None | ERR1063862 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283015 | Sensitive | lineage4.9 | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283049 | Sensitive | lineage4.9 | None | ERR3283031 | HR-TB | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3439265 | Other | lineage4.9 | None | ERR3445503 | HR-TB | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3445504 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797084 | Sensitive | lineage4.9 | None | ERR400350 | Sensitive | lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR3797087 | Sensitive | lineage4 | None | ERR405191 | Other | lineage4.9 | None | ERR4188247 | HR-TB | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4188222 | MDR-TB | La1.8.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769408 | Other | La1.3 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769427 | Other | La1.2 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769521 | HR-TB | None | ERR4769516 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4769555 | Other | La1.3 | None | ERR4796577 | MDR-TB | None | ERR4797588 | MDR-TB | lineage3 | None | ERR6866807 | HR-TB | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6198317 | Other | La1.2 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4811493 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR9119669 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR752229 | Other | lineage4.5 | None | ERR773806 | Sensitive | lineage2.2.1 | None | ERR736875 | HR-TB | lineage4 | None | ERR8975534 | Sensitive | lineage4.3.4.2.1 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9787030 | Sensitive | lineage6 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9787336 | Other | lineage6 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049752 | RR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175473 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181368 | Other | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR17658565 | Other | lineage3 | None | SRR17832798 | Other | lineage3 | None | SRR19303788 | Sensitive | lineage4.8 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR20632814 | Sensitive | lineage4 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR8692893 | Other | lineage4.9 | None | SRR8692887 | Other | None | SRR8692897 | Other | lineage4.9 | None | SRR8692905 | HR-TB | None | SRR8692863 | Other | lineage4;lineage2.2 | None | ERR4815310 | Other | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | ERR4812763 | Other | lineage2.2.1 | None | ERR161173 | Sensitive | lineage4.3.4.2.1 | None | ERR2446544 | Sensitive | lineage3 | nl | ERR181824 | HR-TB | lineage4 | None | ERR1750907 | RR-TB | None | ERR176651 | HR-TB | None | ERR1750944 | Other | lineage4.1.2 | za | SRR3675270 | HR-TB | None | ERR4815550 | Other | lineage4 | None | ERR181887 | HR-TB | None | ERR4814976 | Other | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815909 | Other | lineage4.8 | None | ERR2229197 | Sensitive | lineage4 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR3275548 | Sensitive | lineage3 | nl | ERR212125 | HR-TB | lineage4 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4817915 | RR-TB | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818009 | Sensitive | lineage2.2.1.1 | None | ERR4819051 | Other | lineage4 | None | SRR5007165 | MDR-TB | lineage3 | None | ERR2513259 | Other | lineage3 | None | ERR4818607 | Sensitive | lineage4.9 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4820746 | RR-TB | lineage3 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341456 | Other | None | ERR4819528 | RR-TB | lineage3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4820394 | Other | lineage4.3.4.2.1 | None | SRR5341432 | HR-TB | lineage4 | None | ERR4819910 | Other | lineage4.9 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341313 | HR-TB | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4820586 | Other | lineage3 | gb | SRR5341330 | HR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR2517457 | Sensitive | lineage3 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5535933 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044780 | Other | lineage4.9 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None |
|---|
