lineage | Count |
---|---|
lineage3.1 | 2 |
lineage1.1 | 1 |
lineage5.2 | 2 |
43 | |
lineage2.2 | 5 |
lineage2.2.1 | 5 |
lineage4.9 | 10 |
lineage4 | 10 |
La1 | 1 |
lineage4.1.2.1 | 3 |
La1.8.1 | 1 |
La1.2 | 1 |
lineage1.1.3.1 | 1 |
lineage4.3.2 | 1 |
lineage4.4.1.1 | 2 |
lineage4.5 | 1 |
lineage4.1 | 1 |
lineage1.2.1.1 | 1 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage4.8 | 1 |
lineage4.1.1.3 | 1 |
lineage3 | 1 |
spoligotype | Count |
---|---|
None | 95 |
ID | Drug resistance | Lineage | Country iso2 | ERR323034 | HR-TB | lineage3.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR294248 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR5311090 | HR-TB | None | ERR323036 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323055 | HR-TB | None | ERR323038 | HR-TB | None | ERR323041 | HR-TB | None | SRR7796666 | Pre-XDR-TB | lineage2.2.1 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR323107 | Other | lineage4 | None | ERR3283010 | Other | La1 | None | ERR3283017 | HR-TB | None | ERR3283025 | HR-TB | None | ERR323063 | HR-TB | None | ERR323085 | Sensitive | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR3468544 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR736839 | Other | None | ERR3797015 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797083 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769521 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6358837 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR4188350 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR736835 | HR-TB | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR8976043 | HR-TB | None | SRR1173453 | Other | lineage4.4.1.1 | None | ERR9634265 | Sensitive | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR13837796 | Sensitive | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861413 | Sensitive | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR14782405 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR1035239 | HR-TB | None | SRR6325445 | HR-TB | None | SRR3675482 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675545 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675558 | HR-TB | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341387 | Other | lineage4 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045892 | Sensitive | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | ERR278594 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6325442 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None |
---|