Rv0006 - p.Tyr364His
Drug resistance types
26 Sensitive
4 RR-TB
86 HR-TB
7 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
126 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9 | 14 |
| lineage4.9 | 58 |
| M.canetti;lineage2.1;lineage4.9 | 12 |
| lineage2.2.1 | 10 |
| lineage4.1.2.1 | 14 |
| lineage6.1.3 | 2 |
| La1.2.BCG;La1.8.1 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.8 | 3 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage4.6.1.1 | 2 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| 13 | |
| lineage3 | 5 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage2.1;lineage4.3.2 | 1 |
| lineage4 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9 | 9 |
| lineage1.2.1.1 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.1;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage3.1 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La1.7;lineage4.9;lineage7 | 2 |
| La1.2.BCG | 1 |
| M.canetti;lineage2.1 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 3 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage2.1 | 1 |
| lineage4.9;lineage6.3 | 8 |
| M.canetti;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4.3.4.2.1 | 2 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| La1.8.1 | 2 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage4.5 | 5 |
| La3;lineage2 | 1 |
| La1.7.1 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage2.2 | 1 |
| lineage2.2.2;lineage4 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La1;lineage4.9 | 2 |
| La1;lineage4.1.2 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La3;lineage4.9 | 2 |
| lineage4.6.3;lineage4.9 | 2 |
| La1.6;La3;lineage4.9 | 2 |
| lineage2.2 | 2 |
| La1.7;lineage4.9 | 2 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.3 | 1 |
| lineage3.1.2.1 | 1 |
| La3;lineage2.2.1 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.1.3 | 1 |
| La3 | 1 |
| lineage4.3.3 | 1 |
| lineage4.6.2.2 | 1 |
| La1.2 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage1.1.1 | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 1 |
| lineage4.7 | 1 |
| lineage4.4.1.1 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 251 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR3675444 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR6866807 | Other | lineage4.9 | None | ERR3797016 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR9787165 | Other | lineage6.1.3 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR3675322 | HR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | ERR9786569 | Other | lineage4.8 | None | SRR28351584 | HR-TB | lineage2.2.1 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR1165506 | Other | lineage4.1.2.1 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | SRR18213713 | HR-TB | None | ERR3275220 | Other | lineage3 | nl | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR4817735 | Other | lineage4.8 | None | ERR772255 | MDR-TB | lineage2.1;lineage4.3.2 | None | SRR6045053 | Other | lineage4 | None | SRR6046046 | Other | lineage4.9 | None | ERR323036 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR126608 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4816999 | Other | None | SRR6789626 | Other | None | ERR4769450 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR28119753 | Other | lineage4.9 | None | SRR1196546 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR29093909 | Other | lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | SRR3675561 | Other | M.canetti;lineage2.1;lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR5311089 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR212138 | HR-TB | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR4188350 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR176766 | HR-TB | lineage2.1;lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR3675450 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR1184294 | Other | lineage4.9 | None | ERR1873393 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR502912 | Other | lineage2.2.1 | None | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | ERR386953 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675221 | Other | lineage4.9 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR6789621 | Other | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR473314 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR126600 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR181824 | HR-TB | lineage4.9 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR6044815 | Other | lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR3675487 | Other | M.canetti;lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR1184372 | MDR-TB | None | SRR6045555 | Other | lineage4.9 | None | SRR1640750 | Other | None | SRR3675572 | Other | None | SRR3675568 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | SRR3675457 | Other | lineage4.9 | None | ERR323060 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR5311098 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR038268 | HR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | ERR3797023 | HR-TB | La1.8.1 | None | SRR1172951 | Other | lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR176658 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3468607 | Other | lineage4.9 | None | ERR323063 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR11081145 | Sensitive | lineage4.5 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR2179713 | Sensitive | lineage4.5 | cn | ERR5311083 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR13285068 | Sensitive | lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1166821 | Other | lineage4.1.2.1 | None | ERR4799025 | Other | lineage4.8 | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | SRR3675486 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR161037 | Other | lineage4.9 | None | ERR3283016 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | SRR29231479 | RR-TB | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR3675464 | HR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | SRR29096659 | Sensitive | lineage4.9 | None | ERR4800341 | Other | lineage3 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR28119777 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR9117709 | Other | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR2660539 | Other | lineage4.9 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR5311096 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4407452 | Other | lineage3 | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR8976043 | HR-TB | lineage2.1;lineage2.2;lineage6.3 | None | ERR323038 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR2517528 | RR-TB | lineage3 | nl | ERR4814352 | Other | lineage2.2.1 | None | SRR10808730 | Other | lineage4.9 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR7240492 | HR-TB | La1.7.1 | None | ERR9786604 | Other | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR4818347 | Other | lineage4.1.2 | None | SRR1196566 | Other | lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR6045952 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR4407463 | HR-TB | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR323058 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR3675506 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR3675482 | Other | lineage4.9 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | ERR4816585 | Other | lineage2.2 | None | ERR323040 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR2179636 | HR-TB | lineage4.5 | cn | ERR4815604 | Other | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | ERR212123 | Other | lineage4.9 | None | ERR3468544 | Other | lineage2.1;lineage4.9 | None | SRR29096943 | Sensitive | lineage3.1.2.1 | None | SRR29096879 | Sensitive | lineage4.9 | None | SRR29055629 | MDR-TB | La3;lineage2.2.1 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR1791696 | Other | La1.8.1 | None | SRR3675236 | Other | None | SRR29017461 | Other | La3;lineage4.9 | None | ERR278594 | HR-TB | lineage2.1;lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR3675515 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | SRR23961542 | Other | La1;lineage4.9 | None | SRR1723939 | HR-TB | lineage4.5 | cn | ERR1063849 | HR-TB | lineage4.9 | None | SRR1172817 | Other | La3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR6831950 | Sensitive | lineage4.3.3 | None | SRR1165423 | RR-TB | lineage4.1.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR29017081 | Sensitive | lineage4.9 | None | SRR7496472 | Other | lineage4.9 | None | SRR23961549 | Other | La1.2 | None | SRR10305762 | Sensitive | lineage4.5 | None | SRR6046485 | Other | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6325442 | HR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR234659 | Other | None | ERR124652 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1162864 | Other | lineage4.1.2.1 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR323047 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR1173453 | Other | lineage4.4.1.1 | None | ERR2446118 | Other | lineage4.1.2.1 | nl | SRR3675243 | Other | lineage4.9 | None | SRR3675558 | HR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | SRR3675545 | Other | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None |
|---|
