Rv0006 - c.-533C>T
Drug resistance types
35 Sensitive
3 RR-TB
31 HR-TB
7 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| 39 | |
| lineage4.9 | 10 |
| lineage2.2.1 | 5 |
| lineage4 | 30 |
| lineage4.9;lineage2.1 | 1 |
| La2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.8 | 1 |
| lineage4.3.3 | 1 |
| lineage3.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| La1.8.1 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| La3 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 103 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR176751 | HR-TB | None | ERR176740 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR212121 | HR-TB | None | SRR3675550 | Other | None | SRR5341453 | Sensitive | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR5341387 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341418 | Other | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341470 | HR-TB | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6046460 | HR-TB | None | SRR6045399 | Other | None | SRR6046362 | HR-TB | None | SRR6046397 | Other | None | SRR6046644 | HR-TB | None | SRR6046482 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR6046824 | HR-TB | None | SRR6511621 | HR-TB | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR502510 | Sensitive | lineage4 | None | ERR502889 | Other | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR4024991 | Other | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR067681 | HR-TB | None | ERR1035122 | Sensitive | None | ERR1063896 | Sensitive | None | ERR133986 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3439432 | Other | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3797081 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR4797474 | Other | None | ERR4797264 | Sensitive | None | ERR4797184 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR4798099 | Other | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR6866410 | Sensitive | None | ERR4798406 | HR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR6358991 | HR-TB | None | ERR6866022 | Other | None | ERR987722 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR736865 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR1173777 | Other | lineage4 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR1791747 | Other | La1.8.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR27450479 | Sensitive | La3 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675502 | Other | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR158583 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None |
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