Rv3596c - c.2022T>G


Drug resistance types
15 Sensitive 0 RR-TB 11 HR-TB 5 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 33 Other
lineage Counts
lineage Count
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.7;lineage4.9 5
lineage4.9 24
lineage2.2.1 2
lineage1.1.2 1
lineage4.9;lineage6.3 1
La1.2 1
La1.7;M.canetti;lineage4.9 2
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La3;lineage2.1;lineage4.9 1
lineage4.1.1.3 4
lineage1.2.1.1 1
La1.6;La3;lineage4.9 2
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.6.2.2 2
La1.2.BCG 1
La3;lineage4.9 5
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage1.2.1.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
spoligotype Counts
spoligotype Count
None 65
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR7898221 MDR-TB lineage1.1.2 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR926154 Sensitive lineage4.9 None
SRR23961549 Other La1.2 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR3283042 Other lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR2199988 MDR-TB lineage4.1.1.3 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR550637 MDR-TB lineage4.1.1.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR926163 Other lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR9786711 Sensitive lineage4.6.2.2 None
SRR3675488 Other La1.7;lineage4.9 None
ERR7821163 Other lineage2.2.1 None
SRR1915487 Other La1.2.BCG None
ERR212033 Other lineage4.9 None
ERR926156 Sensitive lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR6044875 Sensitive lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR1063846 HR-TB lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR3283032 Other lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR926164 Other lineage4.9 None
ERR176751 Other lineage4.9 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
SRR12006550 Sensitive lineage1.2.1.2 None
ERR926165 Sensitive lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR926157 Sensitive lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None