Rv0667 - c.1494G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
36 Sensitive
6 RR-TB
25 HR-TB
8 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 52 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4 | 1 |
| 1 | |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage4.1.1.3 | 4 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 3 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage1.2.1.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.4.1.2 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| La1.7;lineage4.9 | 3 |
| lineage4.3.4.2 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La1;lineage4.9 | 2 |
| lineage4.1.2.1 | 1 |
| lineage3 | 3 |
| lineage2.2.1 | 2 |
| lineage4.8 | 4 |
| lineage2.2.1.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.1.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.8.1 | 1 |
| La1.2.BCG | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4.6.1.1 | 2 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.9.1 | 1 |
| lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 105 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4796929 | Sensitive | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR212001 | HR-TB | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR550637 | MDR-TB | lineage4.1.1.3 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR6045219 | HR-TB | lineage4.9 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9896144 | Other | lineage3 | None | ERR7821163 | Other | lineage2.2.1 | None | SRR29096873 | Sensitive | lineage4.9 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR2199988 | MDR-TB | lineage4.1.1.3 | None | ERR6358979 | Other | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR736848 | Other | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR26159063 | RR-TB | lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR29096394 | Sensitive | lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR9786444 | Sensitive | lineage4.8 | None | SRR29231479 | RR-TB | lineage4.9 | None | ERR990545 | Other | lineage3 | None | ERR926163 | Other | lineage4.9 | None | SRR29231425 | Sensitive | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR7240033 | Other | La1.8.1 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | SRR1915487 | Other | La1.2.BCG | None | SRR10808730 | Other | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR28351347 | Other | lineage3 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR13264981 | Sensitive | La1.7;lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR245758 | Other | lineage4.9.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR6046594 | Sensitive | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None |
|---|
