Rv0006 - c.1923C>T


Drug resistance types
14 Sensitive 3 RR-TB 27 HR-TB 13 MDR-TB 4 Pre-XDR-TB 1 XDR-TB 83 Other
lineage Counts
lineage Count
11
lineage4.1.1.3 3
lineage1.2.1.2 1
lineage4.9;lineage6.3 4
lineage2.2.1 7
lineage4.3.3 2
lineage4.1.2.1 9
lineage6.1.3 1
lineage4.9 33
lineage2.1;lineage4.9;lineage6.3 4
La3;lineage2 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage4.9 8
La3;lineage4.9 3
lineage2.1 5
La3;lineage1.1.2 1
lineage4.3.4.2.1 1
lineage1.2.1.1 1
lineage4 2
lineage2.2.1;lineage6.3 1
La1.2;La1.8.1 1
La1;lineage4.9 1
lineage4.1.1.1 1
lineage3 1
La3 2
La3;lineage2.1;lineage4.9 2
lineage4.8 2
M.canetti;lineage2.1;lineage6.3 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage7 1
La3;lineage2.1;lineage4.9;lineage6.3 4
La3;lineage4.8 2
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 1
lineage4.2.2.2 1
La3;lineage2.2.1 1
La3;lineage2.2.2 2
lineage4.4.1.1 1
lineage1.2.2.2 1
lineage1.1.3.1 1
lineage4.3.4.1 1
lineage4.9;lineage7 3
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage2.2 1
lineage3.1 1
lineage4.6.2.2 1
La1.7;lineage4.9;lineage6 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9 2
La1.7;lineage4.9 1
lineage2.2.1;lineage3 1
lineage2.2.2;lineage4 1
La1;lineage4.1.2 1
lineage2.2.1.1 1
spoligotype Counts
spoligotype Count
None 145
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1184381 MDR-TB None
ERR9787197 Other None
ERR11465024 Other lineage4.1.1.3 None
SRR12006550 Sensitive lineage1.2.1.2 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR6046382 Sensitive lineage2.2.1 None
SRR21732980 Other lineage4.3.3 None
ERR4407463 HR-TB None
ERR9786694 Other lineage4.1.2.1 None
ERR9787165 Other lineage6.1.3 None
SRR1172951 Other lineage4.9 None
SRR1196768 MDR-TB None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR18003019 Other lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
SRR1173355 Other lineage4.9 None
SRR3416776 Other lineage2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR1184312 Other lineage2.2.1 None
ERR4814734 Other lineage1.2.1.1 None
ERR2027263 Other lineage4 None
ERR1063883 HR-TB lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
SRR10808805 Other La1;lineage4.9 None
SRR29093909 Other lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR29017461 Other La3;lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR4800341 Other lineage3 None
ERR4817731 HR-TB lineage4.9 None
SRR1172728 RR-TB La3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR2229542 Other lineage4.8 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR6045892 Sensitive lineage4.9 None
ERR502912 Other lineage2.2.1 None
SRR7131023 Other lineage4.1.2.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1172857 Other None
SRR28119805 Other lineage4.9 None
ERR234659 Other None
ERR9786421 Other lineage4.1.2.1 None
SRR1184372 MDR-TB None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR1196566 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
SRR1196583 Other lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR1710057 Other lineage2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR1169194 Other lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR1035157 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
SRR6789626 Other None
SRR29055629 MDR-TB La3;lineage2.2.1 None
SRR29049025 Sensitive lineage4.9 None
ERR13245558 MDR-TB La3;lineage2.2.2 None
ERR13291814 Sensitive lineage4.4.1.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR4797201 Other lineage1.2.2.2 None
ERR702406 Other lineage2.1 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR1173400 Other lineage4.9 None
ERR11466499 Other lineage4.3.4.1 None
ERR12015083 Other La3;lineage4.8 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4799513 HR-TB lineage2.2 None
SRR1184346 HR-TB lineage3.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR29016780 Other lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR25827682 Other None
SRR1173153 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR12142341 HR-TB lineage2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR4819422 HR-TB lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR387051 Other lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
SRR6046210 Other lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR6045548 Sensitive lineage4.9 None
ERR323107 Sensitive lineage4.9 None
ERR11138607 Pre-XDR-TB lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR29093099 MDR-TB La3;lineage2.2.2 None
ERR13264981 Sensitive La1.7;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR26159043 Other lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
SRR28119753 Other lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
SRR1196546 Other lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR29231425 Sensitive lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR4816466 HR-TB lineage4.9 None
SRR28119777 Other lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1172817 Other La3 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR779852 Sensitive lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR3804155 Other lineage4.1.2.1 None