lineage | Count |
---|---|
lineage1.1.1 | 2 |
lineage4.9 | 7 |
15 | |
lineage4 | 2 |
lineage4.1 | 1 |
lineage2.2.1.1 | 4 |
lineage2.2.1 | 3 |
lineage1.1.3.1 | 1 |
lineage3.1.3 | 1 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage1.2.1.1 | 1 |
La1.7.1 | 1 |
spoligotype | Count |
---|---|
None | 39 |
ID | Drug resistance | Lineage | Country iso2 | SRR5067470 | Other | lineage1.1.1 | vn | SRR6045450 | Other | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR2693231 | Other | None | SRR6044890 | Other | lineage4.9 | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR2693257 | Other | None | ERR2693232 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | ERR3797014 | Other | None | SRR6046385 | Other | lineage4.9 | None | ERR067712 | HR-TB | lineage4 | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | SRR6045399 | Other | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR3797017 | Other | None | ERR3797044 | Other | None | ERR473332 | Other | lineage4 | None | ERR3797061 | Other | None | SRR1183106 | Other | lineage2.2.1.1 | None | ERR4769457 | Other | lineage4.9 | None | ERR6866410 | Sensitive | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR3675234 | Other | None | SRR18913742 | Sensitive | lineage3.1.3 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR26400102 | HR-TB | lineage1.1.1 | None | SRR671823 | Sensitive | lineage2.2.1 | cn | SRR3675510 | Other | None | ERR216965 | HR-TB | lineage4.9 | None |
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