Rv0006 - c.1020C>T
Drug resistance types
4 Sensitive
5 RR-TB
13 HR-TB
0 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;M.canetti;lineage4.9 | 2 |
| M.canetti;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage2.2.1.1 | 4 |
| lineage1.1.3.1 | 1 |
| La1.7.1 | 1 |
| lineage4.9 | 6 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage1.1.1 | 2 |
| lineage2.2.1 | 3 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage1.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 32 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR6866410 | HR-TB | lineage4.9 | None | ERR2693231 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | SRR26400102 | HR-TB | lineage1.1.1 | None | SRR671823 | Sensitive | lineage2.2.1 | cn | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR5067470 | Other | lineage1.1.1 | vn | SRR1180147 | RR-TB | lineage2.2.1.1 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | ERR11252736 | Other | lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR779852 | HR-TB | lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | ERR2693257 | HR-TB | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None |
|---|
