Rv0006 - c.1020C>T


Drug resistance types
4 Sensitive 5 RR-TB 13 HR-TB 0 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 10 Other
lineage Counts
lineage Count
lineage2.2.1.1 4
lineage4.9 6
lineage2.2.1 3
lineage1.1.3.1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage1.2.1.1 1
La1.7;M.canetti;lineage4.9 2
lineage1.1.1 2
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;lineage4.9 1
M.canetti;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La3;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.7.1 1
La1.6;La3;lineage4.6.4;lineage4.9 1
spoligotype Counts
spoligotype Count
None 32
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1184024 RR-TB lineage2.2.1.1 None
SRR6045892 Sensitive lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
SRR1183144 RR-TB lineage2.2.1 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR11252736 Other lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR5067470 Other lineage1.1.1 vn
SRR1183106 RR-TB lineage2.2.1.1 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR6866410 HR-TB lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR473332 Other lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR067712 Sensitive lineage4.9 None
SRR26400102 HR-TB lineage1.1.1 None
SRR671823 Sensitive lineage2.2.1 cn