Rv3596c - c.1392C>T
Drug resistance types
24 Sensitive
0 RR-TB
40 HR-TB
2 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
26 Other
lineage Counts
| lineage | Count |
|---|---|
| 37 | |
| lineage4.1 | 1 |
| La2 | 1 |
| lineage4.7 | 1 |
| lineage4.1.2 | 1 |
| lineage4 | 16 |
| lineage4.9 | 10 |
| La1.8.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage6.1.1 | 2 |
| La1.3 | 1 |
| lineage3.1.2 | 1 |
| lineage2.2 | 5 |
| lineage2.2.1 | 4 |
| lineage1.1.3.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| La3 | 1 |
| lineage1.1.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage3 | 1 |
| La1.7.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.3 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 96 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR294266 | HR-TB | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502524 | HR-TB | La2 | None | SRR7496471 | Sensitive | None | ERR323039 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323107 | Other | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR323053 | HR-TB | None | ERR1034634 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | None | ERR3283040 | HR-TB | None | ERR369151 | Sensitive | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR369156 | Sensitive | lineage4.9 | None | ERR3797019 | Other | La1.8.1 | None | ERR3828632 | Sensitive | lineage4.3.4.2 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4769450 | HR-TB | None | ERR400345 | Other | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR4769452 | HR-TB | None | ERR4796577 | MDR-TB | None | ERR4769552 | Other | La1.3 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR736848 | HR-TB | None | ERR736865 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6866410 | Sensitive | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR987722 | HR-TB | None | ERR9787014 | Other | lineage6.1.1 | None | SRR1167384 | Other | lineage4 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1173788 | Other | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR14801749 | Sensitive | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR14782405 | HR-TB | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR17832802 | HR-TB | lineage3 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR3675488 | HR-TB | None | SRR18910194 | HR-TB | lineage2.2 | None | ERR176751 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR4814331 | Sensitive | lineage4.9 | None | ERR181744 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675270 | HR-TB | None | SRR3675222 | Other | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675501 | HR-TB | None | ERR176643 | HR-TB | None | ERR212123 | Other | None | ERR176740 | HR-TB | None | ERR212033 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4819051 | Other | lineage4 | None | SRR5341470 | HR-TB | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | ERR2660539 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6044780 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045053 | Other | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6045217 | Other | lineage4 | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6045399 | Other | None | ERR4831546 | HR-TB | lineage2.2 | None |
|---|
