Rv0676c - c.2394C>G
Drug resistance types
4 Sensitive
3 RR-TB
34 HR-TB
11 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.2.1 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 1 |
| lineage4.9 | 43 |
| lineage1.1.3.1 | 1 |
| lineage3 | 2 |
| La2;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3.4.2.1 | 2 |
| La1.7;lineage4.9 | 1 |
| 2 | |
| lineage4 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| La2;lineage2.2 | 1 |
| lineage2.2.1 | 1 |
| lineage1.2.1.1 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.2;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| lineage4.1.2 | 1 |
| La1.8.1 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 71 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR1873393 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR5341387 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR10809074 | HR-TB | lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR137286 | Other | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | ERR4821005 | Sensitive | lineage3 | gb | SRR1159378 | Other | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR323066 | HR-TB | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR6789626 | Other | None | SRR28351339 | MDR-TB | lineage4 | None | SRR6325445 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR5341298 | Other | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR124636 | HR-TB | lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR1063896 | HR-TB | None | ERR4797474 | Other | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR8976043 | MDR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR1791747 | Other | La1.8.1 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None |
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