Rv1484 - c.-394A>C
Drug resistance types
19 Sensitive
1 RR-TB
28 HR-TB
2 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
57 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 43 |
| lineage2.2.1 | 5 |
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| La1.7.1;lineage4.9 | 1 |
| lineage2.2.1;lineage3 | 1 |
| La1;lineage4.9 | 1 |
| 7 | |
| lineage2.1;lineage6.3 | 2 |
| lineage4.9;lineage6.3 | 6 |
| lineage4.9;lineage7 | 1 |
| La1.2.BCG | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage6.3.1 | 1 |
| La3;lineage2 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4 | 2 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage6.1.3 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| La1.2;La1.8.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.1.3 | 2 |
| lineage4.6.2.2 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1;lineage4 | 2 |
| lineage1.1.2 | 1 |
| lineage2.1;lineage4.9 | 2 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.8 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage4.6.3;lineage4.9 | 2 |
| lineage1.2.1.1 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage3.1 | 1 |
| lineage2.1 | 2 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.3.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 111 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR323107 | Sensitive | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR25827407 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR9117709 | Other | None | SRR3675441 | Other | lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR3675246 | Other | lineage4.9 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | SRR7496472 | Other | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR9786843 | Other | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR18213713 | HR-TB | None | ERR9787139 | Other | lineage6.3.1 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR6045053 | Other | lineage4 | None | SRR6046046 | Other | lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR6046593 | Other | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | SRR3675236 | Other | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR25827778 | MDR-TB | lineage2.2.1 | None | SRR29050859 | Other | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR25827561 | Pre-XDR-TB | lineage2.2.1;lineage4 | None | SRR28044591 | Sensitive | lineage1.1.2 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR9786604 | Other | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR176651 | Other | lineage4.9 | None | ERR9786569 | Other | lineage4.8 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR9786617 | Other | lineage4.1.1.1 | None | ERR4769450 | Other | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | SRR28119777 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR28351442 | HR-TB | lineage3.1 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR1183144 | Other | lineage2.2.1 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR28351342 | HR-TB | lineage2.2.1;lineage4 | None | ERR9787197 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR9786671 | Other | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR3675457 | Other | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR736817 | HR-TB | lineage4.3.4 | None |
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