Rv3919c - c.518dupA
Drug resistance types
0 Sensitive
1 RR-TB
8 HR-TB
11 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.3.1 | 5 |
| lineage1.2.1.1 | 5 |
| lineage2.2.2 | 1 |
| lineage1.2.1.2.1 | 2 |
| lineage4.1.1.3 | 4 |
| lineage3 | 4 |
| lineage3.1.2.1 | 2 |
| lineage4.1.2.1 | 3 |
| lineage1.1.2 | 3 |
| lineage4.3.3 | 3 |
| lineage3.1.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.8 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 38 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR29017592 | MDR-TB | lineage1.1.3.1 | None |
| ERR4814734 | Other | lineage1.2.1.1 | None |
| SRR15316167 | HR-TB | lineage2.2.2 | None |
| ERR13291071 | MDR-TB | lineage1.2.1.2.1 | None |
| SRR29017054 | MDR-TB | lineage1.1.3.1 | None |
| ERR4798022 | Pre-XDR-TB | lineage4.1.1.3 | in |
| ERR2510625 | Pre-XDR-TB | lineage3 | pk |
| ERR4799166 | MDR-TB | lineage3.1.2.1 | in |
| ERR1213914 | Other | lineage4.1.2.1 | ma |
| ERR1213935 | Other | lineage4.1.2.1 | pe |
| SRR11348196 | HR-TB | lineage1.1.2 | None |
| ERR4797246 | Pre-XDR-TB | lineage3 | in |
| SRR5074104 | Other | lineage1.2.1.2.1 | vn |
| ERR11050590 | Other | lineage1.2.1.1 | None |
| SRR11348216 | HR-TB | lineage1.1.2 | None |
| ERR2510585 | MDR-TB | lineage3 | pk |
| ERR400431 | Other | lineage1.2.1.1 | gb |
| ERR4815569 | Other | lineage4.3.3 | gb |
| ERR2027209 | MDR-TB | lineage1.2.1.1 | None |
| ERR4814827 | HR-TB | lineage3.1.2 | gb |
| SRR19304010 | Other | lineage4.3.3 | None |
| SRR22424796 | MDR-TB | lineage4.1.1.3 | None |
| ERR4829758 | HR-TB | lineage4.3.4.2 | it |
| SRR29440890 | Other | lineage1.1.3.1 | None |
| SRR5153213 | Other | lineage4.8 | None |
| SRR29051293 | Other | lineage4.3.3 | None |
| ERR13266110 | HR-TB | lineage3.1.2.1 | None |
| ERR4797338 | Pre-XDR-TB | lineage4.1.1.3 | in |
| ERR3132163 | Other | lineage4.1.2.1 | None |
| ERR4553479 | MDR-TB | lineage1.1.3.1 | None |
| SRR6797619 | MDR-TB | lineage4.1.1.3 | None |
| ERR13259977 | MDR-TB | lineage4.1.1.1 | None |
| ERR4553766 | RR-TB | lineage1.1.3.1 | None |
| ERR2510584 | MDR-TB | lineage3 | pk |
| ERR11068568 | Other | lineage1.2.1.1 | None |
| ERR4820526 | HR-TB | lineage4.6.1.1 | gb |
| SRR23691333 | Other | lineage2.2.1 | None |
| SRR11348215 | HR-TB | lineage1.1.2 | None |
