Rv0006 - c.-940_-938delTTGinsCTC
Drug resistance types
19 Sensitive
1 RR-TB
14 HR-TB
0 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 1 |
| lineage2.2.1 | 3 |
| lineage4.9;lineage7 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.9 | 20 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| La1.6;lineage4 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| La1.7.1 | 1 |
| M.canetti;lineage2.1 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage2;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage1.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 41 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4798504 | RR-TB | lineage3 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR13285068 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR28351554 | Sensitive | La1.6;lineage4 | None | ERR6866807 | Other | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR7240492 | HR-TB | La1.7.1 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR4810624 | HR-TB | lineage2.2.1 | None |
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