SRR1172728
|
RR-TB
|
La3
|
None
|
ERR369160
|
Sensitive
|
lineage4.9
|
None
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|
SRR3675581
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR9970978
|
Sensitive
|
La1;lineage4.1.2
|
None
|
SRR12416840
|
MDR-TB
|
lineage4.9
|
None
|
ERR736867
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR29096873
|
Sensitive
|
lineage4.9
|
None
|
ERR779852
|
Sensitive
|
lineage4.9
|
None
|
ERR373947
|
Other
|
lineage4.9
|
None
|
ERR4816559
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR9786645
|
Other
|
lineage4.6.2.2
|
None
|
SRR3675311
|
Other
|
lineage4.9
|
None
|
SRR7496472
|
Other
|
lineage4.9
|
None
|
ERR349296
|
Sensitive
|
lineage4.9
|
None
|
SRR7131023
|
Other
|
lineage4.1.2.1
|
None
|
ERR3797070
|
Other
|
lineage4.9
|
None
|
ERR11252612
|
Other
|
La3;lineage4.9
|
None
|
ERR4814352
|
Other
|
lineage2.2.1
|
None
|
ERR349330
|
Sensitive
|
lineage4.9
|
None
|
SRR24035883
|
HR-TB
|
lineage4.8
|
None
|
SRR3675555
|
HR-TB
|
lineage2.1;lineage4.9;lineage7
|
None
|
SRR6046382
|
Sensitive
|
lineage2.2.1
|
None
|
SRR5341333
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR1173778
|
Other
|
lineage4.9
|
None
|
ERR176651
|
Other
|
lineage4.9
|
None
|
ERR4810741
|
HR-TB
|
La3;lineage2.1;lineage6.3
|
None
|
ERR363453
|
Sensitive
|
lineage4.9
|
None
|
ERR6358755
|
Other
|
lineage4.6.1.1
|
None
|
SRR18213713
|
HR-TB
|
|
None
|
ERR4817893
|
Other
|
La3;lineage4.8
|
None
|
SRR29096882
|
Sensitive
|
lineage4.9
|
None
|
SRR20969677
|
HR-TB
|
La3;lineage2
|
None
|
ERR161034
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR9787139
|
Other
|
lineage6.3.1
|
None
|
SRR1710057
|
Other
|
lineage2.1
|
None
|
ERR4811075
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4831546
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
SRR1173629
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4817896
|
HR-TB
|
lineage2.2.1
|
None
|
ERR3797069
|
Other
|
lineage4.9
|
None
|
ERR4819932
|
Other
|
lineage4.7
|
None
|
ERR9786627
|
Other
|
lineage4.1.2.1
|
None
|
SRR3416776
|
Other
|
lineage2.1
|
None
|
ERR9117721
|
HR-TB
|
La3;lineage1.1.2
|
None
|
SRR3675529
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR13285068
|
Sensitive
|
lineage4.9
|
None
|
SRR29096935
|
Sensitive
|
lineage4.9
|
None
|
SRR6044790
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR363490
|
Sensitive
|
lineage4.9
|
None
|
ERR363479
|
Sensitive
|
lineage4.9
|
None
|
SRR3675467
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR323115
|
Sensitive
|
lineage4.9
|
None
|
SRR6046066
|
Other
|
lineage4.9
|
None
|
ERR2027263
|
Other
|
lineage4
|
None
|
ERR1063883
|
HR-TB
|
lineage4.9
|
None
|
SRR14801749
|
HR-TB
|
lineage4.9
|
None
|
ERR363474
|
Sensitive
|
lineage4.9
|
None
|
SAMEA2533358
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR1873492
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
ERR349299
|
Other
|
lineage4.9
|
None
|
SRR1196546
|
Other
|
lineage4.9
|
None
|
SRR1184380
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR1063862
|
HR-TB
|
lineage4.9
|
None
|
SRR6045371
|
Other
|
lineage4.9
|
None
|
ERR176779
|
HR-TB
|
lineage4.9
|
None
|
ERR363509
|
Sensitive
|
lineage4.9
|
None
|
ERR4816466
|
HR-TB
|
lineage4.9
|
None
|
ERR702406
|
Other
|
lineage2.1
|
None
|
ERR1063849
|
HR-TB
|
lineage4.9
|
None
|
ERR363502
|
Other
|
lineage4.9
|
None
|
ERR9117709
|
Other
|
|
None
|
ERR5336148
|
Other
|
lineage2.1;lineage6.3
|
None
|
SRR1172234
|
Other
|
lineage4.9
|
None
|
ERR176751
|
Other
|
lineage4.9
|
None
|
SRR3675456
|
RR-TB
|
lineage4.9;lineage7
|
None
|
ERR363447
|
Other
|
lineage4.9
|
None
|
SRR6045706
|
Sensitive
|
lineage4.9
|
None
|
ERR4797054
|
Pre-XDR-TB
|
lineage2.1
|
None
|
SRR3675517
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR212125
|
HR-TB
|
lineage4.9
|
None
|
SRR6045892
|
Sensitive
|
lineage4.9
|
None
|
ERR3804155
|
Other
|
lineage4.1.2.1
|
None
|
SRR12416824
|
HR-TB
|
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
ERR9786642
|
Other
|
lineage4.1.2.1
|
None
|
SRR1172857
|
Other
|
|
None
|
SRR8552928
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR369159
|
Sensitive
|
lineage4.9
|
None
|
ERR181824
|
HR-TB
|
lineage4.9
|
None
|
ERR9786601
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786671
|
Other
|
|
None
|
SRR12142341
|
HR-TB
|
lineage2.1
|
None
|
ERR176549
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR176778
|
HR-TB
|
lineage4.9
|
None
|
ERR9786421
|
Other
|
lineage4.1.2.1
|
None
|
SRR3675539
|
HR-TB
|
lineage4.9;lineage7
|
None
|
SRR1184372
|
MDR-TB
|
|
None
|
ERR4831545
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
ERR2693252
|
Sensitive
|
lineage4.9
|
None
|
SRR6045503
|
Sensitive
|
lineage4.9
|
None
|
SRR3675232
|
Other
|
lineage4.1.2.1
|
None
|
ERR3283036
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4407463
|
HR-TB
|
|
None
|
ERR9786694
|
Other
|
lineage4.1.2.1
|
None
|
ERR9787165
|
Other
|
lineage6.1.3
|
None
|
ERR9786569
|
Other
|
lineage4.8
|
None
|
ERR6866547
|
Other
|
La1.7;lineage4.9;lineage6
|
None
|
SRR10808668
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6046540
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR736817
|
HR-TB
|
lineage4.3.4
|
None
|
ERR3283019
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR369163
|
Sensitive
|
lineage4.9
|
None
|
SRR3742657
|
Pre-XDR-TB
|
La3;M.canetti;lineage2.2.1
|
None
|
ERR369158
|
Other
|
lineage4.9
|
None
|
SRR3675214
|
Other
|
lineage4.9
|
None
|
SRR1184388
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4811022
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR9786682
|
Other
|
lineage4.1.2.1
|
None
|
SRR19303884
|
Other
|
lineage2.1;lineage6.3
|
None
|
SRR3675495
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR6866410
|
Sensitive
|
lineage4.9
|
None
|
SRR3675231
|
MDR-TB
|
lineage4.9;lineage7
|
None
|
ERR363506
|
Sensitive
|
lineage4.9
|
None
|
ERR363421
|
Sensitive
|
lineage4.9
|
None
|
SRR3675574
|
Other
|
lineage4.6.3;lineage4.9;lineage6.3
|
None
|
ERR4811105
|
HR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR15368973
|
Other
|
lineage4.9
|
None
|
ERR4815604
|
Other
|
|
None
|
ERR181887
|
Other
|
lineage4.9
|
None
|
ERR349265
|
Other
|
lineage4.9
|
None
|
ERR373945
|
Sensitive
|
lineage4.9
|
None
|
ERR363426
|
Sensitive
|
lineage4.9
|
None
|
ERR4816999
|
Other
|
|
None
|
ERR4799478
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR363449
|
Sensitive
|
lineage4.9
|
None
|
ERR3445503
|
Other
|
La1.7.1;La1.7.X-unk4
|
None
|
SRR6045327
|
Other
|
lineage2.1;lineage4.3.2;lineage4.9
|
None
|
SRR10808805
|
Other
|
La1;lineage4.9
|
None
|
SRR3675236
|
Other
|
|
None
|
ERR176793
|
Other
|
lineage4.1.1.1
|
None
|
ERR4811311
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4799171
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
ERR4800341
|
Other
|
lineage3
|
None
|
ERR176643
|
Other
|
La3;lineage4.9
|
None
|
ERR736859
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4872094
|
MDR-TB
|
lineage5.2
|
None
|
ERR363445
|
Other
|
lineage4.9
|
None
|
ERR133825
|
HR-TB
|
La1;lineage4.9
|
None
|
ERR8479578
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR1172817
|
Other
|
La3
|
None
|
SRR7496509
|
Other
|
|
None
|
ERR702404
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR1334034
|
Other
|
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
|
None
|
SRR5341302
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
ERR502532
|
Other
|
M.canetti;lineage2.1;lineage6.3
|
None
|
ERR323043
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4798493
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR349266
|
Sensitive
|
lineage4.9
|
None
|
ERR373946
|
Sensitive
|
lineage4.9
|
None
|
SRR3675490
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1184294
|
Other
|
lineage4.9
|
None
|
ERR4816151
|
Sensitive
|
lineage4.8
|
None
|
ERR4798262
|
HR-TB
|
La1.2.BCG
|
None
|
ERR502912
|
Other
|
lineage2.2.1
|
None
|
ERR9119500
|
MDR-TB
|
lineage5.2
|
None
|
ERR363456
|
Sensitive
|
lineage4.9
|
None
|
SRR3675221
|
Other
|
lineage4.9
|
None
|
ERR2514692
|
Other
|
|
None
|
ERR212001
|
HR-TB
|
|
None
|
ERR9787197
|
Other
|
|
None
|
ERR234659
|
Other
|
|
None
|
ERR349264
|
Sensitive
|
lineage4.9
|
None
|
ERR363446
|
Sensitive
|
lineage4.9
|
None
|
ERR7911670
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
ERR4819781
|
Other
|
lineage2.2.1
|
None
|
ERR736875
|
HR-TB
|
lineage4.9
|
None
|
SRR1173633
|
Other
|
lineage4.9
|
None
|
ERR9786604
|
Other
|
|
None
|
SRR3675572
|
Other
|
|
None
|
SRR6045380
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3675465
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR1063858
|
HR-TB
|
lineage4.9
|
None
|
ERR363500
|
Sensitive
|
lineage4.9
|
None
|
SRR6045242
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR3283027
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4818021
|
Other
|
La1.2.BCG;La1.8.1
|
None
|
SRR19304036
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR369162
|
Other
|
lineage4.9
|
None
|
ERR4798431
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
SRR28351347
|
Other
|
lineage3
|
None
|
SRR3742665
|
HR-TB
|
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
ERR387051
|
Other
|
lineage4.9
|
None
|
ERR176568
|
HR-TB
|
La3;lineage2.1;lineage4.9
|
None
|
ERR736871
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR363498
|
Sensitive
|
lineage4.9
|
None
|
ERR736874
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
SRR3675265
|
Other
|
lineage4
|
None
|
ERR6358979
|
Other
|
lineage4.9
|
None
|
ERR4811142
|
RR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR24035884
|
HR-TB
|
lineage4.8
|
None
|
ERR736863
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR349300
|
Sensitive
|
lineage4.9
|
None
|
ERR4814734
|
Other
|
lineage1.2.1.1
|
None
|
SRR6045526
|
Other
|
lineage4.9
|
None
|
ERR736839
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
SRR3675216
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR323045
|
HR-TB
|
lineage1;lineage4.9
|
None
|
SRR1169306
|
Other
|
La3;lineage4.9
|
None
|
SRR16156817
|
Other
|
lineage4.9
|
None
|
SRR6046897
|
Sensitive
|
lineage4.9
|
None
|
SRR7240033
|
Other
|
La1.2;La1.8.1
|
None
|
SRR6789626
|
Other
|
|
None
|
ERR067699
|
Sensitive
|
La1;lineage2;lineage4.9
|
None
|
SRR3675248
|
Other
|
lineage4.9
|
None
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
SRR3675280
|
RR-TB
|
lineage4.9
|
None
|
SRR3675524
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR9117805
|
Other
|
lineage4.3.2
|
None
|
ERR3283044
|
Other
|
lineage4
|
None
|
ERR1063859
|
HR-TB
|
La1.7.1;lineage4.9
|
None
|
ERR363499
|
Sensitive
|
lineage4.9
|
None
|
SRR7535086
|
Other
|
|
None
|