Rv0486 - c.409C>T


Drug resistance types
48 Sensitive 4 RR-TB 46 HR-TB 8 MDR-TB 4 Pre-XDR-TB 2 XDR-TB 118 Other
lineage Counts
lineage Count
lineage6.1.3 1
La1.2.BCG;La1.8.1 1
lineage4.9 83
lineage4.1;lineage4.9 1
lineage3 2
18
La3;lineage2 1
lineage2.1 5
lineage2.1;lineage4.9;lineage6.3 9
M.canetti;lineage2.2.2;lineage6.2 2
lineage2.2.1 9
lineage2.1;lineage6.3 2
lineage2.2 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.8 6
lineage4.1.3 2
La3;lineage4.9 3
La3 2
La3;lineage2.1;lineage4.9 3
lineage4.4.1.1 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.1.2.1 9
lineage2.1;lineage4.9 15
lineage4.9;lineage6.3 2
La1.7;lineage4.9;lineage6 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.3.4.2.1 2
lineage6.3.1 1
M.canetti;lineage2.1;lineage4.9 2
lineage4.7 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4 3
lineage1;lineage4.9 1
La1.2;La1.8.1 1
lineage4.1.1.3 1
La1.7.1;La1.7.X-unk4 1
lineage2.1;lineage4.3.2;lineage4.9 1
La1;lineage4.9 2
lineage4.1.1.1 1
lineage4.3.2 1
lineage5.2 2
lineage1.1.3.1 1
La1;lineage4.1.2 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.6.2.2 1
La1.2.BCG 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 2
lineage4.6.1.1 1
La3;lineage4.8 1
lineage4.3.4 1
La3;M.canetti;lineage2.2.1 1
La3;lineage1.1.2 1
lineage4.9;lineage7 3
lineage1.2.1.1 1
M.canetti;lineage4.9 1
La1.7;lineage4.9 1
La1;lineage2;lineage4.9 1
La1.7.1;lineage4.9 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage2.1;lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 230
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9787165 Other lineage6.1.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR369162 Other lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
SRR28351347 Other lineage3 None
SRR18213713 HR-TB None
SRR29096882 Sensitive lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR1710057 Other lineage2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4817896 HR-TB lineage2.2.1 None
ERR3797069 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4816585 Other lineage2.2 None
ERR363421 Sensitive lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR323115 Sensitive lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR3675280 RR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4800341 Other lineage3 None
ERR176643 Other La3;lineage4.9 None
ERR702406 Other lineage2.1 None
SRR1172817 Other La3 None
SRR24035885 HR-TB lineage4.8 None
SRR1172234 Other lineage4.9 None
SRR7496509 Other None
ERR176751 Other lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496472 Other lineage4.9 None
ERR4816151 Sensitive lineage4.8 None
ERR3797070 Other lineage4.9 None
ERR212001 HR-TB None
SRR1172857 Other None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR12142341 HR-TB lineage2.1 None
ERR4819781 Other lineage2.2.1 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR363500 Sensitive lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR10808668 Sensitive lineage2.2.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR387051 Other lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR9787139 Other lineage6.3.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR363498 Sensitive lineage4.9 None
SRR3675214 Other lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786627 Other lineage4.1.2.1 None
SRR3416776 Other lineage2.1 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR363506 Sensitive lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR363490 Sensitive lineage4.9 None
ERR349300 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4.9 None
SRR15368973 Other lineage4.9 None
ERR181887 Other lineage4.9 None
SRR6046066 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR363437 Sensitive lineage4.9 None
ERR349265 Other lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR363426 Sensitive lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
ERR4816999 Other None
SRR6789626 Other None
ERR363449 Sensitive lineage4.9 None
ERR363474 Sensitive lineage4.9 None
SRR29096394 Sensitive lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR349299 Other lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR3675236 Other None
ERR176793 Other lineage4.1.1.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR9117805 Other lineage4.3.2 None
SRR7535086 Other None
ERR4872094 MDR-TB lineage5.2 None
ERR133825 HR-TB La1;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR363502 Other lineage4.9 None
ERR9117709 Other None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR373947 Other lineage4.9 None
ERR212125 HR-TB lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR502912 Other lineage2.2.1 None
ERR349296 Sensitive lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9119500 MDR-TB lineage5.2 None
ERR363456 Sensitive lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR181824 HR-TB lineage4.9 None
ERR349264 Sensitive lineage4.9 None
ERR176549 Other lineage4.3.4.2.1 None
ERR176778 HR-TB lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR363446 Sensitive lineage4.9 None
SRR24035883 HR-TB lineage4.8 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR3675232 Other lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173778 Other lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR176651 Other lineage4.9 None
ERR9786569 Other lineage4.8 None
ERR363453 Sensitive lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR4817893 Other La3;lineage4.8 None
ERR736817 HR-TB lineage4.3.4 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR369163 Sensitive lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR369158 Other lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR3675265 Other lineage4 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR6358979 Other lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6866410 Sensitive lineage4.9 None
SRR24035884 HR-TB lineage4.8 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR13285068 Sensitive lineage4.9 None
SRR29096935 Sensitive lineage4.9 None
SRR29096710 Sensitive lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
ERR4815604 Other None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR13264981 Sensitive La1.7;lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675248 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR3283044 Other lineage4 None
ERR363509 Sensitive lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR363499 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
SRR1172728 RR-TB La3 None
SRR29096873 Sensitive lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR363447 Other lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR779852 Sensitive lineage4.9 None
ERR349266 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
SRR7131023 Other lineage4.1.2.1 None
SRR3675221 Other lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
ERR2514692 Other None
ERR9787197 Other None
ERR234659 Other None
ERR369159 Sensitive lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR9786421 Other lineage4.1.2.1 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR736875 HR-TB lineage4.9 None
SRR1173633 Other lineage4.9 None
SRR1184372 MDR-TB None
ERR9786604 Other None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR6046382 Sensitive lineage2.2.1 None
SRR3675572 Other None
ERR2693252 Sensitive lineage4.9 None
SRR6045503 Sensitive lineage4.9 None
ERR1063858 HR-TB lineage4.9 None