Rv0668 - c.3306C>T
Drug resistance types
58 Sensitive
1 RR-TB
16 HR-TB
5 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti | 12 |
| lineage4.9 | 51 |
| La3;M.canetti | 8 |
| lineage1.2.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage1.1.2 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4 | 2 |
| lineage4.9;lineage6.3 | 1 |
| La1;lineage4.9 | 2 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.8;lineage4.9 | 2 |
| La1;lineage2;lineage4.9 | 1 |
| 2 | |
| lineage3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.2 | 2 |
| La1.7.1 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
| La2;M.canetti | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.8 | 2 |
| lineage2.2.1 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.2 | 1 |
| lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 106 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10522763 | Sensitive | M.canetti | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR551182 | Sensitive | M.canetti | None | ERR551179 | Sensitive | M.canetti | None | ERR1336824 | Sensitive | La3;M.canetti | None | ERR323107 | Sensitive | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR1336825 | Sensitive | La3;M.canetti | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR3273109 | HR-TB | lineage4 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR18289195 | Sensitive | M.canetti | None | ERR551181 | Sensitive | M.canetti | None | ERR971389 | Sensitive | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR1336821 | Sensitive | La3;M.canetti | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR24061597 | Sensitive | M.canetti | None | ERR502511 | Sensitive | lineage4.9 | None | ERR266125 | Other | M.canetti | None | SRR10522783 | Sensitive | M.canetti | None | ERR702405 | Sensitive | lineage4.9 | None | SRR29096425 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR6358991 | HR-TB | None | ERR926161 | Sensitive | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR266120 | Sensitive | M.canetti | None | ERR323037 | Other | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR176751 | Other | lineage4.9 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR28239782 | Other | La1.7.1 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR1043164 | Other | La3;M.canetti | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR473314 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR266126 | Sensitive | La2;M.canetti | None | SRR1158918 | Sensitive | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR1336822 | Sensitive | M.canetti | None | ERR6358979 | Other | lineage4.9 | None | ERR3597004 | Sensitive | M.canetti | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR13264981 | Sensitive | La1.7;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR29097058 | Other | lineage4.9 | None | ERR1336820 | Sensitive | La3;M.canetti | None | SRR3675387 | Other | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR1336826 | Sensitive | La3;M.canetti | None | ERR551180 | Sensitive | M.canetti | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR1043163 | Other | La3;M.canetti | None | ERR926156 | Sensitive | lineage4.9 | None | ERR1336823 | Sensitive | La3;M.canetti | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None |
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