Rv3457c - c.-331_-329delAAGinsGGC
Drug resistance types
7 Sensitive
0 RR-TB
24 HR-TB
6 MDR-TB
1 Pre-XDR-TB
2 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 4 |
| lineage2.2.1 | 2 |
| lineage4.9 | 15 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.9;lineage6.3 | 2 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage5.2 | 2 |
| lineage4.1;lineage4.8 | 2 |
| La3;lineage4.8 | 1 |
| La3;lineage1.1.2 | 1 |
| M.canetti;lineage4.9 | 3 |
| lineage4.6.2.2 | 4 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.2 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage4.8 | 2 |
| lineage4.3.4.2.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4 | 1 |
| lineage4.4.1.1 | 1 |
| lineage1.1.1 | 1 |
| 2 | |
| La3;lineage2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 58 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9896144 | Other | lineage3 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR6046594 | Sensitive | lineage4.9 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR6046485 | Other | lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR4817893 | Other | La3;lineage4.8 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR990545 | Other | lineage3 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR4816656 | Other | lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | SRR6045555 | Other | lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4819241 | Other | lineage4.9 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR4800341 | Other | lineage3 | None | ERR4816478 | HR-TB | lineage4 | None | ERR176751 | Other | lineage4.9 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | ERR9786843 | Other | None | ERR212001 | HR-TB | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None |
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