EBG00000313339 - n.383G>A
Drug resistance types
8 Sensitive
2 RR-TB
16 HR-TB
18 MDR-TB
4 Pre-XDR-TB
2 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 18 |
| lineage4.1.2.1 | 5 |
| lineage4.3.4.2 | 3 |
| La3;lineage4.9 | 5 |
| La1.6;La3;lineage4.9 | 2 |
| lineage4.3.3 | 3 |
| lineage1.1.1 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.3.4.1 | 3 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.3.2 | 2 |
| lineage4.1.1 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| lineage4.8 | 1 |
| lineage4.6.1.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage5.2 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage3 | 2 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage2.2.1 | 2 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| La1.2.BCG | 1 |
| M.canetti;lineage2.2 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 73 |
Geographic prevalence
Country level data for this variant is available for 19 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4188247 | HR-TB | lineage4.9 | None | ERR1035295 | MDR-TB | lineage4.1.2.1 | br | ERR926154 | Sensitive | lineage4.9 | None | ERR1034902 | Pre-XDR-TB | lineage4.3.4.2 | pt | SRR1169306 | Other | La3;lineage4.9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR1035312 | Pre-XDR-TB | lineage4.3.3 | br | ERR1035294 | MDR-TB | lineage4.1.2.1 | br | SRR14066533 | RR-TB | lineage1.1.1 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR1035315 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR926155 | Other | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | ERR1035316 | MDR-TB | lineage4.3.2 | br | ERR1035354 | MDR-TB | lineage4.1.1 | br | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | ERR9786619 | Sensitive | lineage4.8 | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR1035297 | MDR-TB | lineage4.3.4.1 | br | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR1035301 | MDR-TB | lineage4.3.2 | br | ERR926164 | Other | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR28044634 | Other | lineage3 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR1213874 | MDR-TB | lineage2.2.1 | kr | ERR1034907 | Pre-XDR-TB | lineage4.3.4.1 | pt | ERR1035317 | RR-TB | lineage4.3.4.2 | br | ERR1035296 | HR-TB | lineage4.9 | br | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR926165 | Other | lineage4.9 | None | ERR9896144 | Other | lineage3 | None | ERR926156 | Other | lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | ERR2693231 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR1213873 | MDR-TB | lineage4.3.4.2.1 | rw | ERR926160 | Other | lineage4.9 | None | ERR1035293 | MDR-TB | lineage4.3.4.2 | br | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR1213875 | Sensitive | lineage4.3.3 | de | ERR1213928 | MDR-TB | lineage4.3.3 | pe | ERR2693257 | HR-TB | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR7821163 | Other | lineage2.2.1 | None | SRR1915487 | Other | La1.2.BCG | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR1035299 | MDR-TB | lineage4.1.2.1 | br | ERR1035300 | HR-TB | lineage4.1.2.1 | br | ERR11252612 | Other | La3;lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None |
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