Rv3245c - p.Ala153Ser

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
3 Sensitive 2 RR-TB 38 HR-TB 13 MDR-TB 1 Pre-XDR-TB 2 XDR-TB 39 Other
lineage Counts
lineage Count
La3;M.canetti;lineage2.1;lineage4.9 7
M.canetti;lineage2.1;lineage4.9 5
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage2.2.1 6
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
16
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage2.1;lineage4.9 8
La3;M.canetti;lineage4.8;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 2
lineage4.9 12
lineage4.1.2.1 3
M.canetti;lineage2.2.2;lineage6.2 2
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.9;lineage6.3 3
lineage4.4.1.1 1
lineage2.1 2
lineage4.1.1;lineage4.9 1
lineage4.1.1.1 2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2.1.2 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.3.2 1
lineage4.6.1 1
lineage4 2
lineage4.8 1
M.canetti;lineage2.1;lineage6.3 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 2
M.canetti;lineage4.2;lineage4.9 1
lineage2.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage6.3.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
spoligotype Counts
spoligotype Count
None 98
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786671 Other None
ERR9786604 Other None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173778 Other lineage4.9 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR4818394 Sensitive lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4811105 HR-TB None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR502912 Other lineage2.2.1 None
ERR4810741 HR-TB None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4811311 Other None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR13423649 Sensitive lineage2.2.1 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
SRR12416824 HR-TB None
ERR9117721 HR-TB None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4816585 Other lineage2.2.1 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR702406 Other lineage2.1 None
SRR6325442 HR-TB lineage4.1.1;lineage4.9 None
SRR6325447 HR-TB lineage4.1.1.1 None
ERR9786843 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR4819422 HR-TB lineage4.9 None
SRR3675572 Other None
ERR4818929 HR-TB lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.2.1.2 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3675214 Other lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR176793 Other lineage4.1.1.1 None
ERR4797201 Other None
ERR772255 MDR-TB lineage4.3.2 None
ERR6358755 Other lineage4.6.1 None
ERR4811142 RR-TB None
ERR4811075 Other None
ERR9786525 Other lineage4 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR12142341 HR-TB lineage2.2.1 None
SRR7535086 Other None
ERR4817893 Other lineage4.8 None
ERR4819877 HR-TB lineage4.9 None
SRR20969677 HR-TB lineage2.1 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR4816466 HR-TB lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR234659 Other None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR4819241 Other lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1183049 RR-TB lineage2.2 None
SRR7496517 Other None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR9787139 Other lineage6.3.1 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4817731 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR4816656 Other lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR7496472 Other lineage4.9 None
SRR1184294 Other lineage4.9 None