lineage | Count |
---|---|
lineage4.9 | 6 |
58 | |
lineage4 | 7 |
lineage4.1.2.1 | 5 |
lineage4.6.2.2 | 3 |
lineage2 | 2 |
lineage1.2.2.2 | 1 |
lineage3 | 1 |
lineage5.2 | 2 |
lineage2.2 | 4 |
lineage4.8;lineage4.1 | 2 |
lineage4.8 | 1 |
lineage4.3.3 | 2 |
La3 | 1 |
lineage2.2.1 | 1 |
lineage3.1 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage1.2.1.2 | 1 |
lineage1.1.1 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.3 | 1 |
lineage2.2.1.1 | 1 |
spoligotype | Count |
---|---|
None | 104 |
ID | Drug resistance | Lineage | Country iso2 | ERR3283058 | Other | lineage4.9 | None | ERR294266 | HR-TB | None | ERR3283024 | Other | None | ERR3283013 | MDR-TB | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR3797014 | Other | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3797044 | Other | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4800341 | Other | lineage3 | None | ERR736835 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR6359045 | HR-TB | None | ERR702404 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4812155 | Sensitive | None | ERR6358991 | HR-TB | None | ERR9786384 | Sensitive | lineage4.1.2.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786604 | Other | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786671 | Other | None | ERR9786843 | Other | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1172857 | MDR-TB | None | SRR1172951 | Other | None | SRR1173153 | HR-TB | None | SRR1196546 | HR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1184294 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184381 | MDR-TB | None | SRR1184388 | Other | None | SRR1173363 | HR-TB | None | SRR1173400 | Other | None | SRR1175049 | RR-TB | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184380 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR1196566 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR20969677 | HR-TB | lineage2 | None | SRR25827682 | Other | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR12142341 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675234 | Other | None | ERR176568 | Other | lineage4.3 | None | ERR176751 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR212001 | HR-TB | None | SRR3675510 | Other | None | ERR212033 | HR-TB | None | ERR212123 | Other | None | ERR4816656 | HR-TB | None | ERR212121 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3675574 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | SRR3742665 | HR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR234659 | HR-TB | None | SRR6044780 | Other | lineage4.9 | None | ERR1035138 | MDR-TB | None | ERR2693231 | Other | None | SRR6045450 | Other | lineage4.9 | None | SRR6045526 | HR-TB | None | ERR4818929 | HR-TB | None | ERR2514692 | Other | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6045399 | Other | None | SRR6046245 | Other | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6046644 | HR-TB | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None |
---|