Rv3245c - c.495C>T
Drug resistance types
16 Sensitive
1 RR-TB
4 HR-TB
12 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
8 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.3 | 15 |
| lineage3 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.3.4.2 | 10 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
| lineage4.8 | 1 |
| lineage4.9;lineage7 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La1.7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 44 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21691127 | Sensitive | lineage4.1.1.3 | None | SRR21690898 | Sensitive | lineage4.1.1.3 | None | SRR29230743 | Other | lineage3 | None | ERR11081880 | Sensitive | lineage4.1.1.3 | None | SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR4553535 | MDR-TB | lineage4.3.4.2 | None | ERR4553508 | MDR-TB | lineage4.3.4.2 | None | ERR11050320 | Sensitive | lineage4.1.1.3 | None | SRR29017109 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR4817504 | Sensitive | lineage4.1.1.3 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR21690803 | Sensitive | lineage4.1.1.3 | None | SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR4553931 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR2200055 | Sensitive | lineage4.8 | de | ERR4553934 | MDR-TB | lineage4.3.4.2 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR4830353 | Other | La1.7 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR29017249 | MDR-TB | lineage4.3.4.2 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR29017189 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR29126181 | HR-TB | lineage4.1.1.3 | None | SRR29440845 | Sensitive | lineage4.1.1.3 | None | ERR4553522 | MDR-TB | lineage4.3.4.2 | None | SRR29093875 | Sensitive | lineage4.1.1.3 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR3276041 | Sensitive | lineage4.1.1.3 | nl | ERR3275918 | Sensitive | lineage4.1.1.3 | nl | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR29017375 | MDR-TB | lineage4.3.4.2 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR13291363 | Sensitive | lineage4.1.1.3 | None | SRR21685236 | Sensitive | lineage4.1.1.3 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR29126631 | Sensitive | lineage4.1.1.3 | None | SRR29017208 | MDR-TB | lineage4.3.4.2 | None | ERR6397189 | Sensitive | lineage4.1.1.3 | None |
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