Rv2477c - c.621T>C


Drug resistance types
41 Sensitive 11 RR-TB 89 HR-TB 41 MDR-TB 4 Pre-XDR-TB 2 XDR-TB 98 Other
lineage Counts
lineage Count
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
La1;lineage4.9 1
lineage4.1.2.1 9
17
lineage4.2;lineage4.9 3
La1.7;lineage4.9 2
lineage4.9 71
M.canetti;lineage2.2 3
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.9;lineage6.3 2
lineage2.1;lineage4.9 7
lineage2.1;lineage4.9;lineage6.3 5
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
M.canetti;lineage2.1;lineage4.9 20
M.canetti;lineage4.2;lineage4.9 2
M.canetti;lineage4.9;lineage9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
M.canetti;lineage2.1;lineage4 1
La1.6;La3;M.canetti;lineage4.2.2 1
La3;lineage4.9 10
lineage2.1;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.9 4
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage2.2.1 12
lineage4 4
lineage3.1.2.1 1
lineage4.6.2.2 3
La3;M.canetti;lineage2.1;lineage4.9 9
La1.8.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage4.1.1.1 2
lineage4.9;lineage9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
lineage4.8 2
La1.7.1;lineage4.9 1
lineage4.1.3 2
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage2.2 2
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage2.1 1
M.canetti;lineage2.1;lineage6.3 1
lineage2.2.1.2 2
lineage3 2
lineage1.1.2;lineage4 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage4.3.2.1 2
lineage1.1.3.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 2
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.9;lineage7 3
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage2.2.1.1 5
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
M.canetti;lineage4.2 1
lineage4.8;lineage4.9 2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.6.4;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La3;M.canetti;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
La1.7.X-unk4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage1.1 1
lineage1.1.2 2
La1.7.1;La1.7.X-unk4 1
lineage4.6.1 1
lineage4.2;lineage4.8.1;lineage4.9 2
M.canetti;lineage1 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage1.1.1 1
lineage4.1.1;lineage4.9 1
lineage4.2.1.1 1
lineage4.1.2 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
M.canetti;lineage2.1;lineage3 1
spoligotype Counts
spoligotype Count
None 286
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4769497 Other La1;lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR9786604 Other None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1640750 Other None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR29096541 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
ERR137286 Other lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR18213713 HR-TB None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR502511 Sensitive lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
ERR6358979 Other lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5341300 HR-TB lineage4.9 None
SRR1181251 Other lineage2.2.1 None
SRR1169249 Other lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR6789626 Other None
SRR5341330 Other lineage4.9 None
ERR2027263 Other lineage4 None
SRR29096943 Sensitive lineage3.1.2.1 None
ERR4821655 HR-TB lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4811105 HR-TB None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4819809 HR-TB lineage4.6.2.2 None
ERR4769450 Other lineage4.9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR4811142 RR-TB None
ERR4811075 Other None
ERR4811311 Other None
ERR3283011 Other La3;lineage4.9 None
ERR9786617 Other lineage4.1.1.1 None
SRR10315567 Other lineage2.2.1 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR1063862 HR-TB lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR8976043 HR-TB lineage2.2 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
SRR12142341 HR-TB lineage2.2.1 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
SRR12416824 HR-TB None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR9786682 Other lineage4.1.2.1 None
ERR4799378 Sensitive lineage4.9 None
SRR20969677 HR-TB lineage2.1 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR18549032 HR-TB lineage2.2.1.2 None
SRR5341453 Other lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR6866639 Other lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR29097066 Sensitive lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR9970979 Sensitive lineage4.8 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4769452 Other lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR3283018 HR-TB lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1183145 Other lineage2.2.1 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR9786843 Other None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR4818536 Other lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR2693252 Sensitive lineage4.9 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR4407463 HR-TB None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3468607 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR3675270 Other lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.2.1.2 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR1063896 Sensitive None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR6045053 Other lineage4 None
SRR6046046 Other lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
ERR702405 Sensitive lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR6045548 Sensitive lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4798099 Other lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
ERR3077978 Other lineage1.1 None
SRR14782054 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR8975532 HR-TB lineage4.3.2.1 None
SRR1169306 Other La3;lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR4798139 Sensitive lineage1.1.2 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4800341 Other None
ERR3283047 Sensitive La3;lineage4.9 None
ERR4821053 Other lineage3 None
SRR29050770 Sensitive lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4810741 HR-TB None
ERR3804169 HR-TB lineage4.1.3 None
ERR4797184 Sensitive lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR6358755 Other lineage4.6.1 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR5341461 HR-TB lineage4.9 None
ERR9786711 Sensitive lineage4.6.2.2 None
SRR29231479 RR-TB lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR9786421 Other lineage4.1.2.1 None
SRR6511621 Sensitive lineage4.9 None
SRR3675236 Other None
ERR751326 Other lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
SAMN02585910 Other lineage2.2.1 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR29096387 Sensitive M.canetti;lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR3797064 Other La3;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
SRR12416842 HR-TB lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR6325442 HR-TB lineage4.1.1;lineage4.9 None
SRR6325447 HR-TB lineage4.1.1.1 None
SRR6832178 HR-TB lineage4.2.1.1 None
SRR14782405 HR-TB lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR5341308 Sensitive lineage4.9 None
SRR6079962 HR-TB lineage2.2.1.1 None
SRR9970980 Other lineage4.1.2 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4799513 HR-TB lineage2.2 None
SRR28119752 Other lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR323085 Sensitive lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
ERR11068570 Other lineage4 None
SRR1183144 Other lineage2.2.1 None
SRR29017081 Sensitive lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR4797264 Sensitive lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR1180270 Other lineage2.2.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR11662690 HR-TB lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR5341387 Other lineage4.9 None
SRR28351339 MDR-TB lineage4 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None