Rv3793 - c.1116G>A
Drug resistance types
14 Sensitive
4 RR-TB
6 HR-TB
8 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage1.1.3.1 | 13 |
| lineage4.9 | 2 |
| La3;lineage4.9 | 1 |
| lineage4.1 | 1 |
| lineage4.6.2.2 | 2 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
| M.canetti;lineage4.2 | 1 |
| M.canetti;lineage2.2 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage2.2 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage3 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| 1 | |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1 | 1 |
| lineage4.1.2.1 | 2 |
| La3;lineage2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| lineage4 | 1 |
| lineage1.1.1 | 1 |
| lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 48 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR18911906 | Sensitive | lineage1.1.3.1 | None | ERR2446523 | RR-TB | lineage1.1.3.1 | nl | SRR6797407 | Sensitive | lineage1.1.3.1 | None | SRR1169249 | Other | lineage4.9 | None | ERR3275694 | RR-TB | lineage1.1.3.1 | nl | SRR1169306 | Other | La3;lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR9786526 | Other | lineage4.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR4799469 | Sensitive | lineage1.1.3.1 | in | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR4818552 | Sensitive | lineage1.1.3.1 | gb | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR4818804 | Sensitive | lineage1.1.3.1 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR13292365 | Sensitive | lineage1.1.3.1 | None | SRR6797343 | Sensitive | lineage1.1.3.1 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR990545 | Other | lineage3 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR9786843 | Other | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR1180137 | Other | lineage2.2.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR21686100 | Sensitive | lineage1.1.3.1 | None | ERR4817827 | Sensitive | lineage1.1.2 | None | SRR29053230 | Sensitive | lineage1.1.3.1 | None | ERR9786525 | Other | lineage4 | None | ERR13291601 | Sensitive | lineage1.1.3.1 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR19325553 | Sensitive | lineage1.1.3.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
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