Rv3793 - c.1062C>G


Drug resistance types
6 Sensitive 7 RR-TB 31 HR-TB 14 MDR-TB 2 Pre-XDR-TB 3 XDR-TB 113 Other
lineage Counts
lineage Count
La3;lineage2.1;lineage4.9;lineage6.3 4
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.6.3;lineage4.9;lineage6.3 1
La1.7;lineage4.9 2
lineage4.9 21
lineage2.2.1;lineage3 1
lineage4 2
La3;lineage4.9 4
lineage2.2.1;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.6.2.2 5
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3 4
M.canetti;lineage2.2.2;lineage6.2 2
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.1.1.1 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.9;lineage6.3 7
lineage4.1.3 2
M.canetti;lineage2.1;lineage4.9 2
lineage2.1 3
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
M.canetti;lineage4.9 5
lineage2.1;lineage4.9 10
La3;lineage2.2.1 2
M.canetti;lineage4.2 1
La1.2.BCG 1
lineage4.1.2.1 9
lineage1.1.1 1
lineage2.2.2;lineage4 1
13
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 10
lineage4.1;lineage4.8 2
M.canetti;lineage2.2 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage2.2.1 7
La1.2.BCG;La1.8.1 1
La3;lineage2.1;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage2.1;lineage6.3 2
La3;lineage1.1.2 1
lineage4.6.3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage4.8 3
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.7 1
lineage4.3.2 1
La1;lineage4.9 1
lineage5.2 2
La3 2
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.6.4;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
La3;lineage2.1;lineage4.9 3
lineage2.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.2.2 1
M.canetti;lineage2.1;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage6.1.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage6.3.1 1
spoligotype Counts
spoligotype Count
None 176
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR3675267 Other La1.7;lineage4.9 None
SRR6045526 Other lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR6046066 Other lineage4.9 None
ERR2027263 Other lineage4 None
SRR6046133 HR-TB lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR6045219 HR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4797588 MDR-TB lineage3 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR3797043 Sensitive lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR3283044 Other lineage4 None
ERR990545 Other lineage3 None
ERR3804169 HR-TB lineage4.1.3 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR702406 Other lineage2.1 None
ERR9786611 HR-TB lineage4.1.3 None
SRR3675441 Other lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR9786645 Other lineage4.6.2.2 None
SRR1184294 Other lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR6046485 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR7131023 Other lineage4.1.2.1 None
ERR3797070 Other lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
ERR9786642 Other lineage4.1.2.1 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR9787197 Other None
SRR6789621 Other lineage4.9 None
ERR234659 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR9786525 Other lineage4.1;lineage4.8 None
ERR9786604 Other None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
SRR1180137 Other lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4817896 HR-TB lineage2.2.1 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR18003019 Other lineage2.2.1 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9786444 Sensitive lineage4.8 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR6789626 Other None
SRR3675461 RR-TB lineage4.9 None
SRR26159043 Other lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675236 Other None
ERR9786507 RR-TB lineage4.7 None
ERR9117805 Other lineage4.3.2 None
SRR23961542 Other La1;lineage4.9 None
ERR11081258 Other lineage4.8 None
ERR4872094 MDR-TB lineage5.2 None
ERR4800341 Other lineage3 None
SRR1172728 RR-TB La3 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR7496509 Other None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR29017461 Other La3;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR26399265 Other lineage2.2.1 None
SRR23961549 Other La1.2 None
ERR9119500 MDR-TB lineage5.2 None
ERR11252612 Other La3;lineage4.9 None
ERR2514692 Other None
SRR25827682 Other None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR3675457 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR18213713 HR-TB None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675214 Other lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9896144 Other lineage3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR18910194 HR-TB lineage2.2.2 None
SRR6044942 HR-TB lineage4.9 None
ERR9117709 Other None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1172817 Other La3 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR7496472 Other lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786843 Other None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR1172857 Other None
SRR28119805 Other lineage4.9 None
SRR28119752 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4819781 Other lineage2.2.1 None
SRR6045555 Other lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR9787165 Other lineage6.1.3 None
ERR9786569 Other lineage4.8 None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR26399973 Other La3;lineage4.9 None