Rv0667 - c.681G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
60 Sensitive
4 RR-TB
26 HR-TB
7 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
48 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 75 |
| lineage3 | 2 |
| lineage2.1;lineage4.9 | 2 |
| M.canetti;lineage4.9 | 4 |
| La1.7;lineage4.9 | 10 |
| lineage1.1.1 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4 | 4 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.8 | 3 |
| lineage4.1.2.1 | 5 |
| lineage2.2.1 | 3 |
| La1.7 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.9;lineage6.3 | 2 |
| La1.8.1 | 2 |
| lineage1.2.2.1;lineage4.4.1.1 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| La1.7;lineage4.2 | 1 |
| La1.7;M.canetti;lineage4.9 | 4 |
| 5 | |
| La2;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage2.2.2 | 1 |
| lineage6 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage3.1.3 | 1 |
| lineage4.1.1.3 | 2 |
| La2;lineage2.2 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 146 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR363445 | Other | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR363502 | Other | lineage4.9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR369163 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR363506 | Sensitive | lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR4830353 | Other | La1.7 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR349299 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR29231479 | RR-TB | lineage4.9 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR11462861 | Other | La1.8.1 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | ERR11465711 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR212001 | HR-TB | None | ERR369159 | Sensitive | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR363437 | Sensitive | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR4178226 | Sensitive | lineage4 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR9787030 | Sensitive | lineage6 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4.9 | None | ERR176751 | Other | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR29096246 | Sensitive | La1.7;lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR4817060 | Other | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | ERR6866807 | Other | lineage4.9 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR29096879 | Sensitive | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR3797019 | Other | La1.8.1 | None | SRR6789626 | Other | None | ERR363449 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR6358991 | HR-TB | None | SRR6045371 | Other | lineage4.9 | None | SRR6046802 | Other | lineage4.9 | None |
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