EBG00000313339 - n.1349A>T


Drug resistance types
13 Sensitive 14 RR-TB 66 HR-TB 49 MDR-TB 9 Pre-XDR-TB 3 XDR-TB 142 Other
lineage Counts
lineage Count
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage2.1;lineage2.2;lineage6.3 1
lineage4.3.3 6
M.canetti;lineage2.1;lineage4.9 16
M.canetti;lineage2.1 1
La3;M.canetti;lineage2.1;lineage4.9 12
lineage4.1.2.1 23
lineage4.9 45
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage5.2 2
18
lineage2.2.1 11
La3;lineage4.9 6
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage2.1 3
lineage4.9;lineage6.3 7
lineage4.1;lineage4.8 2
M.canetti;lineage2.2 3
M.canetti;lineage2.1;lineage4.9;lineage6.3 3
lineage2.1;lineage4.9 13
lineage6.1.3 1
lineage4.8 8
lineage2.1;lineage4.9;lineage6.3 7
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.1.1.3 3
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage2.2 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage2.2.2 1
lineage4 2
lineage2.2.1;lineage6.3 1
lineage4.6.2.2 5
lineage1.1.3.2 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage3 8
lineage4.1.2.1.1 2
La3 2
lineage4.3.4.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;lineage2.1;lineage4.9 3
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage3.1 1
lineage1.2.1.2.1 1
lineage1.1 1
La3;M.canetti;lineage3.1 1
lineage4.1.1.1 4
lineage2.2.1.1 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.8;lineage4.9 1
La1.8.1 2
lineage4.3.4.2.1 4
La3;M.canetti;lineage2.2.1 1
La3;lineage2 1
La3;lineage2.2.1 2
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage4.3.2 1
lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage3.1.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.3.4.2 1
lineage4.1.3 2
lineage1.2.2.2 1
lineage4.4.1.1 2
lineage4.8.1 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage2.2.2;lineage4 1
lineage1.2.1.2 1
La1.7.1 1
lineage4.1 1
La3;M.canetti;lineage4.9 2
La3;lineage2.1;lineage6.3 1
lineage6.3.1 3
M.canetti;lineage2.1;lineage4 1
lineage4.6.4 2
M.canetti;lineage4.9 1
lineage2.2.1;lineage3 1
M.canetti;lineage1 1
lineage3.1.1 1
lineage4.2.1 1
lineage4.5 1
M.canetti;lineage2.1;lineage6.3 1
La3;lineage4.8 1
spoligotype Counts
spoligotype Count
None 296
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR5908228 RR-TB lineage4.3.3 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797070 Other lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786843 Other None
SRR1173118 Other lineage2.2.1 None
ERR11252612 Other La3;lineage4.9 None
SRR1172857 Other None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR234659 Other None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR502908 HR-TB lineage2.2.1 None
ERR9786601 Other lineage4.1.2.1 None
SRR12142341 HR-TB lineage2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR1167384 Other La3;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18289200 Other lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR9787165 Other lineage6.1.3 None
SRR1172951 Other lineage4.9 None
SRR13861510 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR1196768 MDR-TB None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR22249687 Sensitive lineage4.8 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3468607 Other lineage4.9 None
SRR3675507 Other lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR29772570 Other lineage4.9 None
SRR13861224 Sensitive lineage4.9 None
ERR11465597 Sensitive lineage4.1.2.1 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675482 Other lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
SRR1173355 Other lineage4.9 None
ERR9786627 Other lineage4.1.2.1 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR1169194 Other lineage4.9 None
ERR12015086 RR-TB lineage4.8 None
SRR1196677 Other lineage2.2 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR1167055 Other lineage4.1.2.1 None
SRR1166821 Other lineage4.1.2.1 None
SRR1173218 Other lineage4.3.3 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675448 Other lineage4.9 None
SRR15368973 Other lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR1035157 Other lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR2027263 Other lineage4 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR3675248 Other lineage4.9 None
ERR553132 MDR-TB lineage4.1.2.1 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR7821123 Other lineage1.1.3.2 None
SRR5709967 MDR-TB lineage2.2.1 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR9786443 Sensitive lineage4.8 None
ERR2517489 Sensitive lineage4.1.2.1 nl
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR990545 Other lineage3 None
ERR4800341 Other lineage3 None
ERR4816478 HR-TB lineage4 None
ERR2446144 Other lineage3 nl
ERR760733 MDR-TB lineage4.1.2.1.1 None
SRR1172728 RR-TB La3 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR702406 Other lineage2.1 None
SRR1172817 Other La3 None
ERR11466499 Other lineage4.3.4.1 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR13861332 Other lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR9786642 Other lineage4.1.2.1 None
SRR1184381 MDR-TB None
SRR28351341 Other lineage4.1.1.1 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR212001 HR-TB None
ERR212033 Other lineage4.9 None
SRR6789621 Other lineage4.9 None
SRR28119752 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR11465024 Other lineage4.1.1.3 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1162864 Other lineage4.1.2.1 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4819422 HR-TB lineage4.9 None
SRR15600376 HR-TB lineage2.2.1.1 None
SRR3675243 Other lineage4.9 None
SRR3675572 Other None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR21732980 Other lineage4.3.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
ERR12015084 Other lineage4.8 None
SRR1196583 Other lineage4.9 None
SRR29016780 Other lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3275220 Other lineage3 nl
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR20969677 HR-TB La3;lineage2 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR8665994 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR9896144 Other lineage3 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR4797037 Pre-XDR-TB lineage3.1.2 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR13861381 HR-TB lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR6789626 Other None
ERR9786617 Other lineage4.1.1.1 None
ERR4797588 MDR-TB lineage3 None
ERR5917710 Other lineage4.1.2.1 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR6785263 Sensitive lineage2.2.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR7535086 Other None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR29096900 Sensitive lineage4.3.4.2 None
ERR3804169 HR-TB lineage4.1.3 None
ERR11081258 Other lineage4.8 None
ERR4797201 Other lineage1.2.2.2 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR1173400 Other lineage4.9 None
SRR1172234 Other lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR29017461 Other La3;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SAMN02414850 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
SRR3675311 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR4813861 Other lineage4.3.3 None
SRR1165584 Other lineage4.1.2.1 None
SRR13861400 Other lineage4.9 None
SRR25827682 Other None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR2517528 RR-TB lineage3 nl
ERR245716 Sensitive lineage2.2.1 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR9786671 Other None
ERR176549 Other lineage4.3.4.2.1 None
ERR9786421 Other lineage4.1.2.1 None
SRR1184372 MDR-TB None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR7240492 HR-TB La1.7.1 None
SRR1173633 Other lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
ERR9786440 Other lineage4.1 None
ERR2446118 Other lineage4.1.2.1 nl
SRR1173363 Other None
SRR1640750 Other None
ERR3275196 Other lineage2.2.1 nl
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1196566 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR1165506 Other lineage4.1.2.1 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR4872096 MDR-TB lineage4.6.2.2 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4872102 MDR-TB lineage4.6.4 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR1183049 RR-TB lineage2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119508 MDR-TB lineage4.6.4 None
SRR28119741 Pre-XDR-TB lineage2.2.1 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1165628 Other La3;lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR1184312 Other lineage2.2.1 None
ERR4972483 Pre-XDR-TB lineage4.1.2.1.1 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR3804162 Sensitive lineage6.3.1 None
SRR15014655 Other M.canetti;lineage1 None
SRR1196474 Other lineage3.1.1 None
SRR1196546 Other lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6458423 HR-TB lineage2.2.1 None
SRR1791696 Other La1.8.1 None
ERR176793 Other lineage4.1.1.1 None
SRR6785268 Sensitive lineage4.2.1 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9787223 Sensitive lineage6.3.1 None
SRR1165699 Other lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4872094 MDR-TB lineage5.2 None
ERR4817731 HR-TB lineage4.9 None
SRR13423544 Other lineage4.5 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR28119777 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR3275215 RR-TB lineage4.1.2.1 nl
SRR3675549 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR7496509 Other None
ERR9119502 MDR-TB lineage4.6.2.2 None
SRR12416840 MDR-TB lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR176751 Other lineage4.9 None
ERR12015083 Other La3;lineage4.8 None