Rv0407 - c.225G>C
Drug resistance types
7 Sensitive
3 RR-TB
129 HR-TB
13 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
102 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4 | 1 |
| 154 | |
| lineage4.1.2.1 | 12 |
| lineage4.3 | 1 |
| lineage4.8 | 2 |
| lineage4 | 12 |
| lineage4.9 | 13 |
| lineage2.2 | 6 |
| lineage2.2.1 | 15 |
| La1.8.1 | 1 |
| lineage4.6.2.2 | 5 |
| lineage4.2.1 | 1 |
| lineage4.2.1.1 | 1 |
| La2 | 1 |
| La1 | 2 |
| lineage6.1.1 | 2 |
| lineage4.1.3 | 2 |
| lineage3.1.2 | 1 |
| lineage2 | 2 |
| lineage3 | 4 |
| lineage4.6.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage1.1.2 | 1 |
| lineage4.7 | 1 |
| lineage4.8;lineage4.1 | 2 |
| lineage4.1.1 | 2 |
| lineage6 | 1 |
| lineage6.3.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| La3 | 1 |
| lineage2.2.1.1 | 2 |
| lineage3.1 | 2 |
| lineage4.3.4.1 | 1 |
| lineage4.5 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 258 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675486 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675222 | Other | None | SRR3675234 | Other | None | ERR176643 | HR-TB | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR176568 | Other | lineage4.3 | None | SRR3675311 | Other | None | ERR212033 | HR-TB | None | ERR176751 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | ERR176740 | HR-TB | None | ERR2027263 | Other | lineage4 | None | SRR3675545 | HR-TB | None | ERR4817037 | Other | lineage4.9 | None | ERR212001 | HR-TB | None | SRR3675550 | Other | None | SRR3675555 | HR-TB | None | ERR212123 | Other | None | ERR4817060 | RR-TB | None | SRR3675558 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3675572 | Other | None | ERR4816585 | Other | lineage2.2 | None | ERR212121 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3675571 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816656 | HR-TB | None | SRR7496472 | Other | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR234659 | HR-TB | None | ERR4818021 | Other | La1.8.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR1035162 | Other | None | ERR4819051 | Other | lineage4 | None | ERR4818929 | HR-TB | None | ERR4818536 | Other | lineage4.9 | None | SRR5341302 | HR-TB | None | ERR4818615 | Other | None | SRR5007188 | Other | lineage4 | None | ERR4819462 | Other | lineage4 | None | SRR5341418 | Other | None | ERR4819781 | Other | lineage2.2.1 | None | ERR2693231 | Other | None | SRR5341333 | HR-TB | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341470 | HR-TB | None | ERR2693254 | Other | None | ERR2693239 | HR-TB | None | ERR2693230 | Other | None | ERR2693257 | Other | None | SRR6045526 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6045010 | Other | lineage4 | None | SRR6046066 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6045399 | Other | None | SRR6046305 | Other | lineage4.9 | None | SRR6046225 | HR-TB | None | SRR6046397 | Other | None | SRR6046362 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6325442 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR502889 | Other | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6785268 | Sensitive | lineage4.2.1 | None | SRR6789626 | Other | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR502524 | HR-TB | La2 | None | ERR502532 | HR-TB | None | ERR323053 | HR-TB | None | ERR5311090 | HR-TB | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7496509 | Other | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | SRR7496517 | Other | None | SRR7535086 | Other | None | SRR7585435 | Other | lineage4.9 | None | ERR323039 | HR-TB | None | ERR323043 | HR-TB | None | ERR133986 | HR-TB | None | ERR067681 | HR-TB | None | ERR1034652 | Other | None | ERR1035157 | Other | lineage4.9 | None | ERR3283010 | Other | La1 | None | ERR3283024 | Other | None | ERR3283017 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283027 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3445501 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3439432 | Other | None | ERR3445502 | HR-TB | lineage4 | None | ERR3468544 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797014 | Other | None | ERR3797036 | HR-TB | None | ERR3797017 | Other | None | ERR3797061 | Other | None | ERR3797044 | Other | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797063 | HR-TB | None | ERR3797069 | Other | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3797083 | HR-TB | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR403298 | HR-TB | lineage4 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4188350 | HR-TB | None | ERR5336148 | Other | None | ERR4407463 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798406 | HR-TB | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798262 | HR-TB | La1 | None | ERR4798504 | Other | lineage3 | None | ERR4800341 | Other | lineage3 | None | ERR6359066 | HR-TB | lineage4 | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6359045 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811105 | HR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6358837 | HR-TB | None | ERR702406 | HR-TB | None | ERR702404 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR736835 | HR-TB | None | ERR736865 | HR-TB | None | ERR736874 | HR-TB | None | ERR736839 | Other | None | ERR736867 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None | ERR9117709 | HR-TB | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR9786507 | Sensitive | lineage4.7 | None | ERR9786604 | Other | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786671 | Other | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9786843 | Other | None | ERR9787197 | Other | None | ERR9787165 | Other | lineage6 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987722 | HR-TB | None | SRR1169249 | Other | La3 | None | ERR990545 | Other | lineage3 | None | SRR1167384 | Other | lineage4 | None | SRR1172728 | MDR-TB | None | SRR1169306 | Other | None | SRR1172234 | Other | None | SRR1172310 | HR-TB | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1172857 | MDR-TB | None | SRR1173153 | HR-TB | None | SRR1173363 | HR-TB | None | SRR1173400 | Other | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173484 | Other | lineage4 | None | SRR1173629 | Other | None | SRR1174897 | HR-TB | None | SRR1173778 | Other | None | SRR1175074 | MDR-TB | None | SRR1175049 | RR-TB | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184294 | HR-TB | None | SRR1184381 | MDR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196494 | MDR-TB | None | SRR12416824 | HR-TB | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR12142341 | HR-TB | None | SRR19303884 | HR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR1640750 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR15368973 | Other | None | SRR18003019 | Other | lineage2.2.1 | None | SRR19304036 | HR-TB | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR20969677 | HR-TB | lineage2 | None | SRR3675502 | Other | None | ERR4815604 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | ERR158583 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675465 | HR-TB | None | SRR3675488 | HR-TB | None |
|---|
