lineage | Count |
---|---|
lineage2.2.1.1 | 1 |
lineage3 | 6 |
lineage4.9 | 26 |
5 | |
lineage2.2.1 | 10 |
lineage4.2.1 | 1 |
lineage4.4 | 1 |
lineage4.4.1.1 | 3 |
lineage4.8 | 3 |
lineage3.1.2.1 | 1 |
lineage4.3 | 1 |
lineage4 | 3 |
lineage4.3.3 | 1 |
La1.8.1 | 3 |
lineage4.3.2.1 | 2 |
lineage2.2.2 | 2 |
lineage4.4.1.2 | 1 |
La1.3 | 1 |
lineage4.9;La1.3 | 1 |
lineage4.5;lineage2.2.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.4.1.1;lineage4.1.2.1 | 1 |
lineage4.1.2.1 | 1 |
La1.6 | 1 |
spoligotype | Count |
---|---|
None | 77 |
ID | Drug resistance | Lineage | Country iso2 | SRR11972264 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173770 | Other | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR16156832 | RR-TB | None | SRR16157123 | Other | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR2101471 | RR-TB | lineage4.4.1.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | ERR4815556 | RR-TB | lineage3 | None | ERR4817069 | RR-TB | None | ERR4815079 | RR-TB | lineage3 | None | ERR4816322 | Other | lineage4.9 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR2432997 | Other | lineage4.8 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR4819383 | RR-TB | lineage4.9 | None | ERR4821057 | HR-TB | lineage4 | None | ERR4820030 | Other | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR1023509 | Other | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821550 | Other | lineage2.2.1 | None | SRR6044952 | RR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6896229 | Other | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR6896383 | RR-TB | lineage4.4.1.1 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6896545 | Other | lineage4.9 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR4769436 | Other | La1.3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR3797074 | Sensitive | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1062928 | RR-TB | lineage4 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1140736 | RR-TB | None |
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