lineage | Count |
---|---|
lineage4.3.4.2.1 | 1 |
lineage4.2.1 | 2 |
lineage2.2.1 | 11 |
lineage4.9 | 14 |
lineage4 | 4 |
lineage2.2.2 | 1 |
lineage4.3.3 | 1 |
lineage4.3.2 | 1 |
lineage5.1.1 | 1 |
lineage4.6.1.2 | 2 |
lineage3 | 1 |
2 | |
lineage3.1.2.1 | 1 |
lineage4.8 | 1 |
lineage4.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 44 |
ID | Drug resistance | Lineage | Country iso2 | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR5866121 | MDR-TB | lineage4.3.3 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR751345 | Other | lineage5.1.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173740 | Other | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | ERR2229791 | RR-TB | lineage4.9 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR22424765 | MDR-TB | lineage4 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR1023509 | Other | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4821057 | HR-TB | lineage4 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6982246 | Sensitive | lineage4 | None |
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