lineage | Count |
---|---|
lineage4 | 12 |
lineage4.9 | 9 |
lineage2.2.1.1 | 3 |
La1.8.1 | 1 |
lineage2.2.1 | 3 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage3.1.2.1 | 1 |
lineage4.8 | 2 |
4 | |
lineage4;lineage2 | 1 |
lineage1.1.2 | 2 |
lineage1.1.1 | 1 |
lineage3 | 2 |
spoligotype | Count |
---|---|
None | 42 |
ID | Drug resistance | Lineage | Country iso2 | ERR6359066 | HR-TB | lineage4 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4814639 | HR-TB | lineage4 | None | ERR1949956 | Sensitive | lineage4.8 | None | SRR3675571 | HR-TB | None | ERR4816762 | Other | lineage4;lineage2 | None | SRR7898221 | MDR-TB | lineage1.1.2 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR6044780 | Other | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR1063855 | Other | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | ERR1034634 | HR-TB | None | ERR1034652 | Other | None | SRR6045010 | Other | lineage4 | None | ERR067712 | HR-TB | lineage4 | None | ERR4596902 | HR-TB | lineage3 | None | ERR3283021 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR4798823 | HR-TB | lineage4 | None |
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