Rv0668 - c.357C>T
Drug resistance types
26 Sensitive
18 RR-TB
4 HR-TB
16 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.9 | 32 |
| lineage2;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.9;lineage7 | 3 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.9;lineage9 | 3 |
| lineage3 | 4 |
| lineage4.8 | 1 |
| 1 | |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.4.1.1.1 | 2 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4 | 1 |
| lineage6.1.1 | 2 |
| lineage1;lineage4.9 | 1 |
| lineage3.1.2.2 | 1 |
| lineage2.2.1 | 2 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage3.1.2.1 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 79 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1238558 | Other | lineage4.9 | None | ERR4820586 | Other | lineage3 | gb | SRR1180410 | Sensitive | lineage4.9 | None | ERR4814878 | Sensitive | lineage4.8 | None | ERR987722 | MDR-TB | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | ERR176675 | Sensitive | lineage4.3.4.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | SRR26159047 | RR-TB | lineage4.6.3;lineage4.9 | None | SRR1172310 | MDR-TB | lineage4.9 | None | ERR387051 | RR-TB | lineage4.9 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR6045002 | RR-TB | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR1181349 | Sensitive | lineage4 | None | ERR3799304 | RR-TB | lineage6.1.1 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR6046382 | RR-TB | lineage2.2.1 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR4829606 | Sensitive | lineage4.1.2.1 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR1062918 | Other | lineage3 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1180345 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR9787014 | RR-TB | lineage6.1.1 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SRR26936983 | MDR-TB | lineage2.2.1 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR4815709 | Sensitive | lineage4.1.2.1 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None |
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