Rv3601c - c.-444C>T


Drug resistance types
11 Sensitive 5 RR-TB 42 HR-TB 15 MDR-TB 4 Pre-XDR-TB 2 XDR-TB 92 Other
lineage Counts
lineage Count
lineage4.9 17
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La3;lineage4.9 3
lineage2.1;lineage4.9;lineage6.3 10
lineage2.1;lineage4.3.2;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage5.2 2
lineage4.1.2.1 20
La2;lineage4.9 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage2.2.1 6
lineage2.1;lineage4.9 12
lineage2.1 5
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage3 2
19
lineage4.9;lineage6.3 4
lineage2.2.2;lineage4.1.2.1 1
lineage2.1;lineage6.3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.8 1
lineage4.8 2
La3;lineage1.1.2 1
lineage4.3.4.2.1 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage2.2.1;lineage6.3 1
lineage4.1.3 2
lineage4.1.1.1 2
lineage4.3.2;lineage4.9 1
lineage4.3.2 1
M.canetti;lineage4.9 2
M.canetti;lineage2.1;lineage4.9 2
La1.7;lineage4.3.4.1 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La3;lineage2 1
La3 1
La3;lineage2.2.1 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.6.3;lineage4.9 1
La3;lineage2.1;lineage4.9 3
lineage6.3.1 1
lineage2.2 2
La1.6;La3;lineage4.9 2
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La1.2.BCG;La1.8.1 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage4 1
lineage4.2.2.2 1
lineage1.2.2.2 1
M.canetti;lineage2.1;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 2
lineage4.6.2.2 1
La3;lineage2.1;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
lineage1.1.2 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 171
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046133 HR-TB lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR3797070 Other lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184294 Other lineage4.9 None
ERR495004 Other lineage4.1.2.1 None
ERR323039 MDR-TB La2;lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR6785267 Other lineage2.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR9119500 MDR-TB lineage5.2 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR3416776 Other lineage2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR3283018 HR-TB lineage4.9 None
ERR1633940 Sensitive lineage4.1.2.1 za
SRR7131023 Other lineage4.1.2.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786682 Other lineage4.1.2.1 None
SRR3675572 Other None
ERR9786671 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR11252612 Other La3;lineage4.9 None
ERR234659 HR-TB None
ERR2514692 Other None
SRR25827682 Other None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR10748242 Pre-XDR-TB lineage2.2.2;lineage4.1.2.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
ERR2514327 HR-TB lineage4.8 None
SRR5341330 Other lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR26399973 Other La3;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR176549 Other lineage4.3.4.2.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3804169 HR-TB lineage4.1.3 None
SRR6045219 HR-TB lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675248 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR176793 Other lineage4.1.1.1 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR9117805 Other lineage4.3.2 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR12416840 MDR-TB lineage4.9 None
SRR1172817 Other La3 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR6046485 Other lineage4.9 None
SRR7496509 Other None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR9117709 Other None
SRR6789626 Other None
SRR7535086 Other None
SRR18213713 HR-TB None
ERR4407463 HR-TB None
ERR11775346 RR-TB lineage4.1.2.1 None
ERR4817060 Other None
SRR10869313 Sensitive lineage4.1.2.1 None
ERR1633851 Other lineage4.1.2.1 za
ERR9119760 Sensitive lineage4.1.2.1 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR1710057 Other lineage2.1 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR20969708 HR-TB lineage2.2 None
ERR702406 Other lineage2.1 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
SRR6045555 Other lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR13423646 Sensitive lineage2.2.1 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR279473 Other lineage4.1.2.1 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR3283032 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR279636 Sensitive lineage4.1.2.1 None
SRR3725653 Sensitive lineage4.1.2.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR495167 Sensitive lineage4.1.2.1 None
ERR4797201 Other lineage1.2.2.2 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR8699120 RR-TB lineage4.1.2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR9786645 Other lineage4.6.2.2 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR20970016 Other lineage2.2 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
ERR9786604 Other None
ERR4815604 Other None
ERR212001 HR-TB None
SRR3675236 Other None
ERR4816999 Other None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR279637 Sensitive lineage4.1.2.1 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675275 Other lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4797954 Sensitive lineage1.1.2 in
SRR3675581 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
ERR5987301 Sensitive lineage4.1.2.1 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR8699780 RR-TB lineage4.1.2.1 None
ERR2229084 Sensitive lineage4.8 dk
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR9786627 Other lineage4.1.2.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None