Rv3601c - c.-645C>A
Drug resistance types
0 Sensitive
1 RR-TB
14 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
40 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 7 |
| lineage2.1;lineage4.9 | 4 |
| lineage4 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage4.1.3 | 2 |
| lineage4.1.1.1 | 2 |
| lineage4.1.2.1 | 4 |
| lineage2.2.1 | 4 |
| 4 | |
| La3;M.canetti | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.1 | 3 |
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| La3;lineage2.2.1 | 1 |
| lineage4.9;lineage6.3 | 2 |
| La3;lineage4.8 | 2 |
| lineage6.3.1 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| La3;lineage4.9 | 1 |
| La3;lineage1.1.2 | 1 |
| lineage4.8 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 58 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1173778 | Other | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR6789626 | Other | None | ERR9787197 | Other | None | SRR28119805 | Other | lineage4.9 | None | SRR28119777 | Other | lineage4.9 | None | ERR266125 | Other | La3;M.canetti | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR1710057 | Other | lineage2.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR15368973 | Other | lineage4.9 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR7496472 | Other | lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | SRR26937071 | MDR-TB | La3;lineage2.2.1 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR4407463 | HR-TB | None | ERR4817893 | Other | La3;lineage4.8 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1184294 | Other | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR12015083 | Other | La3;lineage4.8 | None | SRR1196546 | Other | lineage4.9 | None | SRR3416776 | Other | lineage2.1 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR11465024 | Other | lineage4.1.1.3 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR7496509 | Other | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR1184312 | Other | lineage2.2.1 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None |
|---|
