Rv3596c - c.900C>T


Drug resistance types
81 Sensitive 11 RR-TB 26 HR-TB 21 MDR-TB 9 Pre-XDR-TB 0 XDR-TB 33 Other
lineage Counts
lineage Count
lineage4.9 19
lineage4.8 4
19
lineage4 44
lineage4.3.2.1 3
lineage4.2.1 1
lineage2.2.1 64
lineage1.1.2 2
lineage4.6.2.2 1
lineage4.3 1
lineage2.2 1
lineage2.2.2 2
lineage5.1.2 1
lineage4.1.2.1 5
lineage3 5
lineage4.9;La1.3 1
lineage1.2.1.2.1 1
lineage4.6.1.1 1
lineage4.1 1
lineage6 1
lineage4.4.1.1;lineage4.1.2.1 1
lineage4.3.3 1
La1.4 1
lineage4.1.1 1
spoligotype Counts
spoligotype Count
None 181
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4819863 RR-TB lineage4.9 None
ERR4819794 Sensitive lineage4.8 None
SRR5341333 HR-TB None
SRR6045503 HR-TB None
SRR6045706 Sensitive lineage4 None
SRR6045002 MDR-TB lineage4.9 None
SRR6044838 Other lineage4.9 None
SRR6045233 HR-TB None
SRR6045053 Other None
SRR6045050 Sensitive lineage4.3.2.1 None
SRR6046385 Other lineage4.9 None
SRR6046046 Other None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046382 HR-TB lineage2.2.1 None
SRR6046802 Other lineage4 None
ERR4828257 Other lineage2.2.1 None
SRR6046863 Sensitive lineage1.1.2 None
SRR6046878 HR-TB lineage4 None
SRR6152664 Sensitive lineage2.2.1 ca
SRR6046897 Sensitive lineage4 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502472 Other lineage4.6.2.2 None
ERR502478 RR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
SRR7535086 Other None
ERR502479 RR-TB lineage4.9 None
ERR502481 Pre-XDR-TB lineage4.9 None
SRR671722 MDR-TB lineage2.2.1 cn
ERR3275941 RR-TB lineage4.3 nl
SRR8651645 Pre-XDR-TB lineage2.2.1 cn
ERR1063839 HR-TB lineage2.2 None
SRR9971122 MDR-TB lineage4.8 None
DRR185024 Other lineage2.2.2 None
SRR8651649 Pre-XDR-TB lineage2.2.1 cn
ERR1063857 HR-TB None
ERR349266 Sensitive lineage4.9 None
ERR349264 Sensitive lineage4 None
ERR349265 Sensitive lineage4 None
ERR349298 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR349330 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4 None
ERR369158 Sensitive lineage4 None
ERR369159 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR369162 Sensitive lineage4 None
ERR373946 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR373947 Sensitive lineage4 None
ERR400538 RR-TB lineage5.1.2 None
ERR387051 HR-TB None
ERR4178309 Other lineage4.1.2.1 None
ERR4178226 Sensitive lineage4 None
ERR4797588 MDR-TB lineage3 None
ERR4596910 Sensitive lineage4 None
ERR4769474 HR-TB lineage4 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769521 HR-TB None
ERR4800341 Other lineage3 None
ERR4798431 HR-TB None
ERR4811074 HR-TB lineage2.2.1 cn
ERR4810975 MDR-TB lineage2.2.1 cn
ERR4808964 RR-TB lineage2.2.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4810886 Sensitive lineage2.2.1 cn
ERR4811572 MDR-TB lineage2.2.1 cn
ERR6336766 Other lineage1.2.1.2.1 None
ERR6865502 Sensitive lineage4 None
ERR6358755 Other lineage4.6.1.1 None
ERR9786440 Other lineage4.1 None
ERR6865513 Other lineage4.1.2.1 None
ERR9030480 RR-TB lineage2.2.1 None
ERR9119669 HR-TB None
ERR6866807 HR-TB lineage4 None
ERR736835 HR-TB None
ERR9786569 Other lineage4.8 None
SRR10809188 Sensitive lineage2.2.1 None
ERR9786627 Other lineage4.1.2.1 None
ERR9787030 Sensitive lineage6 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1062928 RR-TB lineage4 None
ERR9787197 Other None
SRR10305779 Sensitive lineage2.2.1 None
SRR10305832 Sensitive lineage2.2.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR12142326 MDR-TB lineage2.2.1 None
SRR11972301 RR-TB lineage2.2.1 None
SRR12142329 MDR-TB lineage2.2.1 None
SRR11349186 MDR-TB lineage4.3.3 None
SRR12142325 MDR-TB lineage2.2.1 None
SRR12142337 Sensitive lineage2.2.1 None
SRR12142350 MDR-TB lineage2.2.1 None
SRR12142399 HR-TB lineage2.2.1 None
SRR12142367 MDR-TB lineage2.2.1 None
SRR12142362 MDR-TB lineage2.2.1 None
SRR12142351 MDR-TB lineage2.2.1 None
SRR15723021 Other lineage2.2.1 None
SRR12416824 HR-TB None
SRR15315754 MDR-TB lineage2.2.1 None
SRR15315716 Sensitive lineage2.2.1 None
SRR15316385 MDR-TB lineage2.2.1 None
SRR15368734 Sensitive lineage2.2.1 None
SRR15723018 HR-TB lineage2.2.1 None
SRR15723147 Sensitive lineage2.2.1 None
SRR15723138 Sensitive lineage2.2.1 None
SRR18910154 Sensitive lineage2.2.1 None
SRR15723235 Sensitive lineage2.2.1 None
SRR15723236 HR-TB lineage2.2.1 None
SRR16156775 Other lineage4.9 None
SRR16157123 Other lineage4.9 None
SRR16278274 Other La1.4 None
SRR17703718 HR-TB lineage2.2.1 None
SRR15723213 Other lineage2.2.1 None
SRR15723276 Other lineage2.2.1 None
SRR15723300 Other lineage2.2.1 None
SRR16370422 MDR-TB lineage2.2.1 None
SRR1710073 Other lineage2.2.1 cn
SRR1710084 Sensitive lineage2.2.1 cn
SRR1710103 Sensitive lineage2.2.1 cn
SRR21277460 Sensitive lineage2.2.1 None
SRR21277025 Sensitive lineage2.2.1 None
SRR21277310 Sensitive lineage2.2.1 None
SRR21277404 Sensitive lineage2.2.1 None
SRR20969857 MDR-TB lineage2.2.1 None
SRR21277230 Sensitive lineage2.2.1 None
SRR21277414 Sensitive lineage2.2.1 None
SRR21279431 Sensitive lineage2.2.1 None
SRR21277518 Sensitive lineage2.2.1 None
SRR21277558 Sensitive lineage2.2.1 None
SRR21277510 Other lineage2.2.1 None
SRR21277795 Sensitive lineage2.2.1 None
SRR3675284 HR-TB lineage4.9 None
SRR21677870 Sensitive None
SRR21031690 MDR-TB lineage2.2.1 None
SRR21887756 Pre-XDR-TB lineage2.2.1 None
ERR4815310 Other None
ERR3276156 Sensitive lineage2.2.1 nl
SRR1723491 Sensitive lineage2.2.1 cn
SRR3675270 HR-TB None
SRR3675280 HR-TB lineage4.9 None
ERR4813263 MDR-TB lineage4.8 None
SRR3675209 Sensitive lineage4.9 None
ERR3276147 Sensitive lineage2.2.1 nl
SRR3675265 Other lineage4 None
SRR3675292 Sensitive lineage4 None
ERR4816113 Sensitive lineage4.1.1 None
ERR4815550 Other lineage4 None
SRR3675527 RR-TB lineage4.9 None
SRR3675456 HR-TB None
ERR2145511 Sensitive lineage1.1.2 None
SRR3675555 HR-TB None
ERR4816729 Sensitive lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
SRR4033524 Sensitive lineage4.3.2.1 None
ERR4817998 Other lineage3 None
SRR5073791 Other lineage2.2.1 vn
ERR4818811 Pre-XDR-TB lineage2.2.1 None
ERR2514125 Other lineage3 None
SRR5065251 Sensitive lineage2.2.1 vn
ERR2513649 Sensitive lineage3 gb
ERR2513724 Sensitive lineage4.3.2.1 None