Rv0668 - c.879C>G


Drug resistance types
13 Sensitive 7 RR-TB 49 HR-TB 17 MDR-TB 8 Pre-XDR-TB 1 XDR-TB 151 Other
lineage Counts
lineage Count
21
lineage2.1 5
lineage4.2;lineage4.9 3
lineage4.9;lineage6.3 7
La1.7;lineage4.9 2
lineage4.1.2.1 12
lineage2.2.1;lineage4.5 1
lineage4.9 51
lineage2.1;lineage4.9 15
lineage4.3.3 3
lineage4.1.1.1 3
lineage2.1;lineage4.9;lineage6.3 9
lineage4.8 5
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.8 2
La3;lineage2 1
La3;lineage2.2.1 2
lineage2.2.1 18
lineage1.1.2 2
M.canetti;lineage2.1;lineage4.9 2
lineage4.7 1
lineage2.1;lineage6.3 2
lineage2.2 3
M.canetti;lineage4.9 3
La2;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4 1
lineage4.4.1.1 3
lineage4.3.4.2.1 2
La3;lineage4.9 5
lineage4.9;lineage9 1
lineage4.1.1.3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;lineage2.1;lineage4.9 2
lineage4.2;lineage4.8.1;lineage4.9 2
La1.7;lineage4.9;lineage7 1
lineage2.2.2;lineage4 1
lineage4.6.2.2 3
lineage4.9;lineage7 1
lineage3 3
lineage3.1.2.1;lineage4 1
La1.2.BCG;La1.8.1 1
lineage6.3.1 1
La2;lineage2.2 1
La3;lineage1.1.2 1
La3;lineage2.2.2 1
lineage2.2.1;lineage3 1
lineage4.2.2.2 1
La1.7.1;La1.7.X-unk4 1
lineage4.3.2 1
lineage4.2.2 1
lineage4.1.3 2
La3 2
lineage2.2.1.1 3
lineage6.1.2 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage1.1.1 1
lineage4.1.2 1
lineage6.1.3 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.3.4 1
La3;M.canetti;lineage2.2.1 1
lineage2.2.2 1
lineage1;lineage4.9 1
lineage2.2.1;lineage6.3 1
La3;lineage4.3.4 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1.7.1;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.4.1.2 1
lineage4.3.4.1 1
lineage4.8.1 1
M.canetti;lineage2.1;lineage6.3 1
spoligotype Counts
spoligotype Count
None 246
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9786671 Other None
SRR12142341 HR-TB lineage2.1 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR21747017 MDR-TB lineage2.2.1;lineage4.5 None
ERR4815752 Other lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR6866807 Other lineage4.9 None
SRR21732980 Other lineage4.3.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR4407463 HR-TB None
ERR9786694 Other lineage4.1.2.1 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1710057 Other lineage2.1 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
SRR1175074 Other None
ERR4817896 HR-TB lineage2.2.1 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR9786682 Other lineage4.1.2.1 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR3416776 Other lineage2.1 None
SRR1169194 Other lineage4.9 None
SRR1196677 Other lineage2.2 None
ERR13267017 Pre-XDR-TB lineage2.2.1 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6046066 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SRR6046521 Other lineage4.4.1.1 None
ERR11465628 Sensitive lineage4.3.4.2.1 None
ERR4816999 Other None
SRR26159043 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR29016901 Other La3;lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR3283021 HR-TB lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR11465025 Other lineage4.1.1.3 None
ERR1063849 HR-TB lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1180172 Other lineage2.2.1 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR12015083 Other La3;lineage4.8 None
SRR29017461 Other La3;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR2229542 Other lineage4.8 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR1183144 Other lineage2.2.1 None
ERR3283018 HR-TB lineage4.9 None
ERR502912 Other lineage2.2.1 None
ERR3804155 Other lineage4.1.2.1 None
SRR11662690 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR4817060 Other None
ERR4814352 Other lineage2.2.1 None
ERR11465024 Other lineage4.1.1.3 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR176778 HR-TB lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR3470647 Other lineage3 None
ERR4819781 Other lineage2.2.1 None
ERR736875 HR-TB lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR1173363 Other None
SRR3675572 Other None
SRR3675510 Sensitive La3;lineage4.9 None
ERR4818615 Sensitive None
ERR1063858 HR-TB lineage4.9 None
SRR28351455 Other lineage3.1.2.1;lineage4 None
SRR1172951 Other lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR181744 HR-TB La3;lineage4.9 None
SRR1196583 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR18213713 HR-TB None
ERR9787139 Other lineage6.3.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR3675214 Other lineage4.9 None
ERR4817735 Other lineage4.8 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR7496517 Other None
SRR20969708 HR-TB lineage2.2 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR1173218 Other lineage4.3.3 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR13245558 MDR-TB La3;lineage2.2.2 None
ERR11138607 Pre-XDR-TB lineage2.2.1 None
SRR15368973 Other lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR4769521 RR-TB lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
SRR6045219 HR-TB lineage4.9 None
ERR9786617 Other lineage4.1.1.1 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR9786515 Other lineage4.1.2.1 None
ERR1063862 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR9117805 Other lineage4.3.2 None
ERR2179803 Sensitive lineage4.2.2 cn
ERR3804169 HR-TB lineage4.1.3 None
ERR11081258 Other lineage4.8 None
ERR4800341 Other lineage3 None
SRR1172728 RR-TB La3 None
SRR28119777 Other lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR702406 Other lineage2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR3797047 MDR-TB lineage4.9 None
SRR1172817 Other La3 None
SRR1173400 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR212125 HR-TB lineage4.9 None
ERR9787030 RR-TB lineage6.1.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR7496472 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
ERR3797070 Other lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR14066533 Sensitive lineage1.1.1 None
SRR25827682 Other None
SRR1172857 Other None
ERR9787197 Other None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR181824 HR-TB lineage4.9 None
ERR502908 HR-TB lineage2.2.1 None
SRR21690574 Other lineage4.1.2.1 None
ERR12268496 Sensitive lineage4.4.1.1 None
SRR29231479 RR-TB lineage4.9 None
SRR1184372 MDR-TB None
SRR6785227 Other lineage2.2.1 None
SRR3675457 Other lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR4818347 Other lineage4.1.2 None
SRR3675232 Other lineage4.1.2.1 None
SRR29096541 Other lineage4.9 None
ERR9787165 Other lineage6.1.3 None
SRR1173778 Other lineage4.9 None
ERR176651 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR6045359 Sensitive lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR18003019 Other lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
ERR9786627 Other lineage4.1.2.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184312 Other lineage2.2.1 None
ERR4815604 Other None
SRR18910194 HR-TB lineage2.2.2 None
ERR181887 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR29051077 Other lineage4.9 None
SRR6789626 Other None
SRR7898221 MDR-TB lineage1.1.2 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR13265287 Sensitive lineage2.2.1 None
ERR9786711 Sensitive lineage4.6.2.2 None
SRR1181091 Other lineage2.2.1.1 None
SRR6046594 Sensitive lineage4.9 None
ERR9117709 Other None
SRR3675549 Other lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR11466499 Other lineage4.3.4.1 None
SRR1172234 Other lineage4.9 None
SRR7496509 Other None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR9786645 Other lineage4.6.2.2 None
SRR1180147 Other lineage2.2.1.1 None
SRR6046485 Other lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR1184381 MDR-TB None
SRR5341412 Pre-XDR-TB lineage3 None
SRR3675221 Other lineage4.9 None
SRR28119805 Other lineage4.9 None
SRR28119752 Other lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None