EBG00000313339 - n.719T>C


Drug resistance types
4 Sensitive 15 RR-TB 29 HR-TB 66 MDR-TB 5 Pre-XDR-TB 3 XDR-TB 88 Other
lineage Counts
lineage Count
lineage4.1.2.1 10
lineage4.8 5
lineage2.1;lineage4.9 12
lineage4.9 31
lineage2.2.1 9
La3 2
lineage4.1.1.3 4
La3;M.canetti;lineage2.1;lineage4.9 11
M.canetti;lineage4.2 1
lineage1.1 1
La1.7.1 1
La3;M.canetti;lineage3.1 1
lineage4.3.4.2.1 1
La3;lineage2.1;lineage4.9;lineage6.3 3
M.canetti;lineage2.1;lineage4.9;lineage6.3 3
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.9;lineage6.3 5
11
lineage3 3
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage2.2;lineage6.3 1
lineage6.3.1 1
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage2.1;lineage4.9 12
lineage4.6.4 2
M.canetti;lineage2.2 3
lineage2.1;lineage4.9;lineage6.3 8
lineage2.1 3
lineage2.2.1;lineage3 1
lineage4.8.1 1
lineage2.2.1;lineage6.3 1
lineage4.1;lineage4.8 1
lineage4.3.2.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.3.4.1 1
La3;lineage4.8 1
La3;lineage2 1
lineage1.2.2.2 1
La3;lineage2.1;lineage4.9 2
La3;lineage2.2.1 1
lineage6.1.3 1
La1.7;lineage4.2 1
lineage4.6.2.2 1
lineage4.1.1.1 2
M.canetti;lineage2.1;lineage4 1
lineage2.2.2 1
lineage4.9.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.1.3 2
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
lineage4.3.3 2
lineage4.5 1
M.canetti;lineage2.1;lineage6.3 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage2.1 1
lineage1.2.1.2.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.7 1
lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage4.9 2
La3;lineage2.1;lineage6.3 1
La1.2 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage6.3 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.6.1.1 1
M.canetti;lineage4.9 1
lineage4 1
La3;M.canetti;lineage4.8;lineage4.9 1
spoligotype Counts
spoligotype Count
None 210
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3804155 Other lineage4.1.2.1 None
ERR11049020 Other lineage4.8 None
ERR9786694 Other lineage4.1.2.1 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR28119741 Pre-XDR-TB lineage2.2.1 None
SRR1172817 Other La3 None
ERR11465024 Other lineage4.1.1.3 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
SRR7240492 MDR-TB La1.7.1 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR9786642 Other lineage4.1.2.1 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR9786604 Other None
SRR28044634 Other lineage3 None
ERR4407463 HR-TB None
SRR28119805 Other lineage4.9 None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR13861510 Other lineage4.9 None
ERR4800341 HR-TB lineage3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR3675507 RR-TB lineage4.9 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR3675549 Other lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR3675482 RR-TB lineage4.9 None
ERR11466242 Sensitive lineage4.1.1.3 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR4872102 MDR-TB lineage4.6.4 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR11488396 MDR-TB lineage4.8.1 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675248 Other lineage4.9 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
ERR2229143 RR-TB lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
SRR1165699 Other lineage4.9 None
ERR12015084 Other lineage4.8 None
ERR4819877 HR-TB lineage4.9 None
ERR8665994 RR-TB lineage4.9 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR3283042 HR-TB lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR11466499 Other lineage4.3.4.1 None
ERR12015083 Other La3;lineage4.8 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
ERR11081258 Other lineage4.8 None
ERR4797201 Other lineage1.2.2.2 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR9787165 Other lineage6.1.3 None
SRR23961559 Other La1.7;lineage4.2 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
ERR4800527 MDR-TB lineage2.2.1 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
ERR11252664 Other lineage2.2.1 None
ERR9786843 Other None
SRR1640750 RR-TB None
SRR6789626 Other None
SRR7535086 Other None
SRR28119777 Other lineage4.9 None
SRR13861288 Other lineage4.9 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
SRR3675502 Sensitive lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR13423649 Other lineage2.2.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR11465665 Other lineage4.1.1.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR18003019 Other lineage2.2.1 None
ERR245758 Other lineage4.9.1 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11043061 Sensitive lineage4.9 None
ERR867545 Other lineage4.9 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3804169 HR-TB lineage4.1.3 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797043 Sensitive lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR867544 Other lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1196566 Other lineage4.9 None
SRR3675448 Other lineage4.9 None
SRR21732980 Other lineage4.3.3 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR13423544 Other lineage4.5 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR9786611 HR-TB lineage4.1.3 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
SRR12416840 MDR-TB lineage4.9 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
SRR3675311 Other lineage4.9 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR7496523 Other lineage4.7 None
ERR9786671 Other None
SRR18289200 Other lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR234659 HR-TB None
SRR25827682 Other None
ERR9787197 Other None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR9119508 MDR-TB lineage4.6.4 None
SRR23961549 Other La1.2 None
SRR1165506 Other lineage4.1.2.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR12015085 Other lineage4.8 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR11465025 Other lineage4.1.1.3 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR12015086 RR-TB lineage4.8 None
ERR702406 Other lineage2.1 None
ERR2693228 RR-TB lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1184312 Other lineage2.2.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR9786627 Other lineage4.1.2.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
ERR2027263 Other lineage4 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR26159043 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1173400 Other lineage4.9 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR176793 Other lineage4.1.1.1 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR4817731 HR-TB lineage4.9 None
SRR1172728 RR-TB La3 None